RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 Q96M85 177 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 GPX7Q96SL4 187 aaPredicted RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 POMPQ9Y244 141 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 MMP24Q9Y5R2 645 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 TEX13CA0A0J9YWL9 993 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 PRSS37A4D1T9 235 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 ACOT8O14734 319 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 CTLA4P16410 223 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 SLC6A6P31641 620 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 PRKDCP78527 4128 aaKnown RBP11.9□□□□□ -0.5
RPP40-201ENST00000319533 KPNB1Q14974 876 aaKnown RBP11.9□□□□□ -0.5
RPP40-201ENST00000319533 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
RPP40-201ENST00000319533 ADCK1Q86TW2 530 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 KLBQ86Z14 1044 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 PARP8Q8N3A8 854 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 LINC00471Q8N535 108 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 RAB40AQ8WXH6 277 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 NRIP3Q9NQ35 241 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
RPP40-201ENST00000319533 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 KIR2DS1A0A191URI9 304 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 TNFRSF11BO00300 401 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 SOCS2O14508 198 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 MAGEA2P43356 314 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 RGS6P49758 472 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 KCNMB1Q16558 191 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 C16orf87Q6PH81 154 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 OR8G5Q8NG78 346 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 OR13G1Q8NGZ3 307 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 OR1F12Q8NHA8 337 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 SLC7A6Q92536 515 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 RASD2Q96D21 266 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 SLC30A2Q9BRI3 323 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 IER3IP1Q9Y5U9 82 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
RPP40-201ENST00000319533 VWFP04275 2813 aa11.89□□□□□ -0.51
RPP40-201ENST00000319533 CIB2O75838 187 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 RPS2P15880 293 aaKnown RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 SRP9P49458 86 aaKnown RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 HMGA2P52926 109 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 TRAP1Q12931 704 aaKnown RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 TSPAN31Q12999 210 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 RFX4Q33E94 735 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 C1orf94Q6P1W5 598 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 JAZF1Q86VZ6 243 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 GLB1L2Q8IW92 636 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 OR5L1Q8NGL2 311 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 ZNF420Q8TAQ5 688 aaPredicted RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 TMIGD2Q96BF3 282 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 ERMAPQ96PL5 475 aaPredicted RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 TMEM246Q9BRR3 403 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 IFT27Q9BW83 186 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 SYT4Q9H2B2 425 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 OR52D1Q9H346 318 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 RERGLQ9H628 205 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 REEP1Q9H902 201 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 PLA2G2EQ9NZK7 142 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
RPP40-201ENST00000319533 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
RPP40-201ENST00000319533 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 IQCF6A8MYZ5 107 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 IMPA2O14732 288 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 MLNRO43193 412 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 SLC16A7O60669 478 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 KHDRBS3O75525 346 aaKnown RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 CCNB2O95067 398 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 PPP1R3DO95685 299 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 TXNDC12O95881 172 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 DBHP09172 617 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 RAP2AP10114 183 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 NOS3P29474 1203 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 PMELP40967 661 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 GSSP48637 474 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 FXYD6P3P58550 94 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 BPIFB3P59826 476 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 GNB2P62879 340 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 DEFA6Q01524 100 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 HLXQ14774 488 aaPredicted RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 RPL13AP3Q6NVV1 102 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 PGBD2Q6P3X8 592 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 DNM1P34Q6PK57 102 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms