RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 MTRF1O75570 445 aaKnown RBP17.02■□□□□ 0.31
RTN4-201ENST00000317610 GLULP15104 373 aa17.02■□□□□ 0.31
RTN4-201ENST00000317610 CYCSP99999 105 aaKnown RBP17.02■□□□□ 0.31
RTN4-201ENST00000317610 HAGHLQ6PII5 290 aaPredicted RBP17.02■□□□□ 0.31
RTN4-201ENST00000317610 RNF141Q8WVD5 230 aa17.02■□□□□ 0.31
RTN4-201ENST00000317610 DCUN1D4Q92564 292 aa17.02■□□□□ 0.31
RTN4-201ENST00000317610 ZC3H10Q96K80 434 aaKnown RBP17.02■□□□□ 0.31
RTN4-201ENST00000317610 WWTR1Q9GZV5 400 aa17.02■□□□□ 0.31
RTN4-201ENST00000317610 SOHLH2Q9NX45 425 aa17.02■□□□□ 0.31
RTN4-201ENST00000317610 IGHV5-51A0A0C4DH38 117 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 C5orf51A6NDU8 294 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 LILRA5A6NI73 299 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 TMEM14DPA8MWL7 114 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 MS4A18H0YCH9 400 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 SOX1O00570 391 aaPredicted RBP17.01■□□□□ 0.31
RTN4-201ENST00000317610 TTRP02766 147 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 H2BFMP0C1H6 154 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 GNB3P16520 340 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 FMODQ06828 376 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 MS4A18Q3C1V0 323 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 HLA-DQA1Q5Y7H0 255 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 OR10R2Q8NGX6 335 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 KCNK17Q96T54 332 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 C8orf33Q9H7E9 229 aaPredicted RBP17.01■□□□□ 0.31
RTN4-201ENST00000317610 PDE7BQ9NP56 450 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 SLC5A6Q9Y289 635 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 NPIPB13A6NJU9 1138 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 CEACAM18A8MTB9 384 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 NPIPB4C9JG80 1138 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 ADAM10O14672 748 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 KCNAB3O43448 404 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 IFNA6P05013 189 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 LYL1P12980 280 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 IL11P20809 199 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 EFNA3P52797 238 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 STK11Q15831 433 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 RAB11FIP2Q7L804 512 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 ZNF248Q8NDW4 579 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 PAQR8Q8TEZ7 354 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 ADAT3Q96EY9 351 aaPredicted RBP17.01■□□□□ 0.31
RTN4-201ENST00000317610 CUTCQ9NTM9 273 aa17.01■□□□□ 0.31
RTN4-201ENST00000317610 REV3LO60673 3130 aa17■□□□□ 0.31
RTN4-201ENST00000317610 OR6C76A6NM76 312 aa17■□□□□ 0.31
RTN4-201ENST00000317610 ABCD3P28288 659 aa17■□□□□ 0.31
RTN4-201ENST00000317610 OR1D4P47884 311 aa17■□□□□ 0.31
RTN4-201ENST00000317610 AKR1C2P52895 323 aa17■□□□□ 0.31
RTN4-201ENST00000317610 GFERP55789 205 aa17■□□□□ 0.31
RTN4-201ENST00000317610 AKR1C1Q04828 323 aa17■□□□□ 0.31
RTN4-201ENST00000317610 OR7A5Q15622 319 aa17■□□□□ 0.31
RTN4-201ENST00000317610 TMEM71Q6P5X7 295 aa17■□□□□ 0.31
RTN4-201ENST00000317610 TMEM88Q6PEY1 159 aa17■□□□□ 0.31
RTN4-201ENST00000317610 WDFY1Q8IWB7 410 aa17■□□□□ 0.31
RTN4-201ENST00000317610 KDM8Q8N371 416 aa17■□□□□ 0.31
RTN4-201ENST00000317610 ZNF441Q8N8Z8 693 aa17■□□□□ 0.31
RTN4-201ENST00000317610 ZSCAN4Q8NAM6 433 aaPredicted RBP17■□□□□ 0.31
RTN4-201ENST00000317610 MARCH1Q8TCQ1 289 aa17■□□□□ 0.31
RTN4-201ENST00000317610 ZDHHC19Q8WVZ1 309 aaPredicted RBP17■□□□□ 0.31
RTN4-201ENST00000317610 RRNAD1Q96FB5 475 aaKnown RBP17■□□□□ 0.31
RTN4-201ENST00000317610 SELENOIQ9C0D9 397 aa17■□□□□ 0.31
RTN4-201ENST00000317610 PTGES2Q9H7Z7 377 aa17■□□□□ 0.31
RTN4-201ENST00000317610 MMP26Q9NRE1 261 aa17■□□□□ 0.31
RTN4-201ENST00000317610 IGKV1D-43A0A0B4J1Z2 117 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 TLCD2A6NGC4 264 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 H0YIZ8 118 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 H3BMH7 237 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 PMP2P02689 132 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 FAM157CP0CG43 387 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 DAP3P51398 398 aaKnown RBP16.99■□□□□ 0.31
RTN4-201ENST00000317610 PLEKHN1Q494U1 663 aaPredicted RBP16.99■□□□□ 0.31
RTN4-201ENST00000317610 C9orf50Q5SZB4 431 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 DRAM2Q6UX65 266 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.99■□□□□ 0.31
RTN4-201ENST00000317610 OR4A4PQ8NGN8 299 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 ELP5Q8TE02 316 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 MLXQ9UH92 298 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 A0A0B4J2A0 478 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 C13orf42A0A1B0GVH6 325 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 SLC6A9P48067 706 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 SRSF3P84103 164 aaKnown RBP16.99■□□□□ 0.31
RTN4-201ENST00000317610 AIMP2Q13155 320 aaKnown RBP16.99■□□□□ 0.31
RTN4-201ENST00000317610 TMEM128Q5BJH2 165 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 VAX1Q5SQQ9 334 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 IL34Q6ZMJ4 242 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 TTLL10Q6ZVT0 673 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 OR4K15Q8NH41 348 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 TERB2Q8NHR7 220 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 CNTNAP3BQ96NU0 1288 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 TGM7Q96PF1 710 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 CENPMQ9NSP4 180 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 SHPKQ9UHJ6 478 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 PIAS3Q9Y6X2 628 aa16.99■□□□□ 0.31
RTN4-201ENST00000317610 ZNF98A6NK75 572 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 NPIPA5E9PKD4 350 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 F8W036 122 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 ZNF217O75362 1048 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 IGLV3-19P01714 112 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 CHRM2P08172 466 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 GNALP38405 381 aa16.98■□□□□ 0.31
RTN4-201ENST00000317610 CLDN6P56747 220 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms