RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CELA3AP09093 270 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 APOBEC1P41238 236 aaKnown RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TAS2R43P59537 309 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ACTA2P62736 377 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ACTG2P63267 376 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TRIP6Q15654 476 aaKnown RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 SCGB2B2Q4G0G5 96 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 WIPI1Q5MNZ9 446 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ACER2Q5QJU3 275 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 GSG1LQ6UXU4 331 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 STAC2Q6ZMT1 411 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 SLC16A9Q7RTY1 509 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 FAM220AQ7Z4H9 259 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 KRT77Q7Z794 578 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 RTN4RL2Q86UN3 420 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 VASH2Q86V25 355 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ABHD6Q9BV23 337 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 PARD6AQ9NPB6 346 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM9BQ9NQ34 198 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 B3GAT1Q9P2W7 334 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 OPN4Q9UHM6 478 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 SESN1Q9Y6P5 492 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 OR2M5A3KFT3 312 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 AIPO00170 330 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TP53I11O14683 189 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 MT-ATP6P00846 226 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 GP1BAP07359 652 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 GLO1Q04760 184 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 AKIRIN2Q53H80 203 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF626Q68DY1 528 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF660Q6AZW8 331 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 FAM122CQ6P4D5 195 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 DBX2Q6ZNG2 339 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 CDC20BQ86Y33 519 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 OR14L1PQ8NHC6 308 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF519Q8TB69 540 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 LIPHQ8WWY8 451 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF385AQ96PM9 386 aaKnown RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 MFFQ9GZY8 342 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF700Q9H0M5 742 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ZCCHC4Q9H5U6 513 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM231Q9H6L2 316 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 EXO5Q9H790 373 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 DKKL1Q9UK85 242 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 NXT1Q9UKK6 140 aaKnown RBP6.76□□□□□ -1.33
TRIM55-202ENST00000315962 NPTNQ9Y639 398 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 COL12A1Q99715 3063 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 DOCK7Q96N67 2140 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 LOC102723996A0A087X1L8 192 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 TRAV1-2A0A0B4J238 106 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ANKRD20A5PA0PJZ0 165 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 OGG1O15527 345 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ZIC3O60481 467 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 SLC34A2O95436 690 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 TGM6O95932 706 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 GABRA1P14867 456 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 PPP3CBP16298 524 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF43P17038 809 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 PRKXP51817 358 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 LUMP51884 338 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ART1P52961 327 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 CLDN17P56750 224 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 DYRK1AQ13627 763 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 GGTLC2Q14390 218 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 GK2Q14410 553 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 WDR38Q5JTN6 314 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM164Q5U3C3 297 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 CDCP2Q5VXM1 449 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 C3orf33Q6P1S2 294 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 RPL22L1Q6P5R6 122 aaKnown RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 OPN5Q6U736 354 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 FIP1L1Q6UN15 594 aaKnown RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 OR2G2Q8NGZ5 317 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 OTOSQ8NHW6 89 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 TSEN15Q8WW01 171 aaKnown RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ROBO4Q8WZ75 1007 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ST8SIA1Q92185 356 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 SIGLEC12Q96PQ1 595 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 TAAR9Q96RI9 348 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 SHARPINQ9H0F6 387 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 CHST11Q9NPF2 352 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 CGGBP1Q9UFW8 167 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-202ENST00000315962 POLR1DQ9Y2S0 133 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 IGLV1-36A0A0B4J1U3 117 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 FAM166BA8MTA8 275 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 F5H5P2 479 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 GPR31O00270 319 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 RER1O15258 196 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 DKK1O94907 266 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 SERPINA3P01011 423 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 PATE4P0C8F1 98 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF823P16415 610 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 GALP22466 123 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 CLRN1P58418 232 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 EXT1Q16394 746 aa6.75□□□□□ -1.33
TRIM55-202ENST00000315962 C9orf135Q5VTT2 229 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms