RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CLRN3Q8NCR9 226 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 TMEM174Q8WUU8 243 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 KIR3DX1Q9H7L2 352 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 EMCNQ9ULC0 261 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 PPP1R3CQ9UQK1 317 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 DOCK6Q96HP0 2047 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 CDC20Q12834 499 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 TRMT12Q53H54 448 aaKnown RBP14.13□□□□□ -0.15
HCFC1-201ENST00000310441 TMEM255BQ8WV15 326 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 ISL2Q96A47 359 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 GLIPR2Q9H4G4 154 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 ZNF354AO60765 605 aaPredicted RBP14.13□□□□□ -0.15
HCFC1-201ENST00000310441 CD80P33681 288 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 PDZD11Q5EBL8 140 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 SMIM12Q96EX1 92 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 PECRQ9BY49 303 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 C9orf152Q5JTZ5 239 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 C3orf30Q96M34 536 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 LOC107986453A0A1B0GWG9 222 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 LINC01387J3KSC0 135 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 GCAP28676 217 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 TRAT1Q6PIZ9 186 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 PLPP6Q8IY26 295 aa14.13□□□□□ -0.15
HCFC1-201ENST00000310441 SEBOXQ9HB31 216 aaPredicted RBP14.13□□□□□ -0.15
HCFC1-201ENST00000310441 ANKRD61A6NGH8 418 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 GOSR1O95249 250 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 H7C1C5 153 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 SELENBP1Q13228 472 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 LAIR1Q6GTX8 287 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 VRK3Q8IV63 474 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 FGF13Q92913 245 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 TARM1B6A8C7 271 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 GPR37O15354 613 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 PIGAP37287 484 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 OR2B8PP59922 312 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 IGFBP7Q16270 282 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 SMN1Q16637 294 aaKnown RBP14.12□□□□□ -0.15
HCFC1-201ENST00000310441 PRAMEF20Q5VT98 475 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 CYHR1Q6ZMK1 362 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 ERGIC1Q969X5 290 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 CSNK1G1Q9HCP0 422 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 PSENENQ9NZ42 101 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 ZNF346Q9UL40 294 aaKnown RBP14.12□□□□□ -0.15
HCFC1-201ENST00000310441 FZD6O60353 706 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 CD37P11049 281 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 NHSL2Q5HYW2 709 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 ZDHHC23Q8IYP9 409 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 GALNT16Q8N428 558 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 TCTEX1D1Q8N7M0 179 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 GPR32P1Q8NGA4 272 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
HCFC1-201ENST00000310441 SLC5A6Q9Y289 635 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 SELENOFO60613 162 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 LYG2Q86SG7 212 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 EDAQ92838 391 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 RPUSD4Q96CM3 377 aaKnown RBP14.12□□□□□ -0.15
HCFC1-201ENST00000310441 LANCL2Q9NS86 450 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 CTSFQ9UBX1 484 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 ACOT8O14734 319 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 PIGPP57054 158 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 NECAP1Q8NC96 275 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 SLCO4A1Q96BD0 722 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 TRGV10A0A0A0MS01 117 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 FIGNL2A6NMB9 653 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 PTGESO14684 152 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 NXPH3O95157 252 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 MMP26Q9NRE1 261 aa14.12□□□□□ -0.15
HCFC1-201ENST00000310441 IGKV6D-21A0A0A0MT36 114 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 CLEC18AA5D8T8 446 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 SLCO4C1Q6ZQN7 724 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 EXD3Q8N9H8 876 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 CLEC18CQ8NCF0 446 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 IFI44Q8TCB0 444 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 KCNK15Q9H427 330 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 WNK2Q9Y3S1 2297 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 GPR31O00270 319 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 IRS1P35568 1242 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 P2RX3P56373 397 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 OR2A2Q6IF42 318 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 GABARAPL3Q9BY60 117 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 MYLKQ15746 1914 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 ZNF320A2RRD8 509 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 ZP3P21754 424 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 GLRA1P23415 457 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 HOXD9P28356 352 aaPredicted RBP14.11□□□□□ -0.15
HCFC1-201ENST00000310441 PRTGQ2VWP7 1150 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 TMEM123Q8N131 208 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 CELF2-AS1Q8N7Q2 184 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 TMEM56Q96MV1 263 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 SUCNR1Q9BXA5 334 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 PLA2G12AQ9BZM1 189 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 CCDC187A0A096LP49 1063 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 BCL2L11O43521 198 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 OR2J3O76001 311 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 MPGP29372 298 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 ZNF252P-AS1Q0IIN9 211 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 CLLU1OSQ5K130 101 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 TRAPPC1Q9Y5R8 145 aa14.11□□□□□ -0.15
HCFC1-201ENST00000310441 EFSO43281 561 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms