RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LOC390937A0A1W2PQ73 354 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 F5H5K5 113 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 MRPL33O75394 65 aaKnown RBP18.68■□□□□ 0.58
ATG4D-201ENST00000309469 TPPPO94811 219 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 CCL1P22362 96 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 BDKRB2P30411 391 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 EFNB2P52799 333 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 C1orf100Q5SVJ3 147 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 MTFR2Q6P444 385 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 ANKRD16Q6P6B7 361 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 PLXDC2Q6UX71 529 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 ZNF813Q6ZN06 617 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 NAA40Q86UY6 237 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 JAGN1Q8N5M9 183 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 OR1M1Q8NGA1 313 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 C15orf40Q8WUR7 153 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 FOXRED1Q96CU9 486 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-201ENST00000309469 PGAM5Q96HS1 289 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 FOXB1Q99853 325 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 DEFB127Q9H1M4 99 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 AUNIPQ9H7T9 357 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 SLC17A5Q9NRA2 495 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 EMC3Q9P0I2 261 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 LIPGQ9Y5X9 500 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 GABARAPH6UMI1 98 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 OTX1P32242 354 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-201ENST00000309469 TAS2R20P59543 309 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 RNFT1Q5M7Z0 435 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 ZNF529Q6P280 563 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 DOK3Q7L591 496 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 SIAH3Q8IW03 269 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 SOX7Q9BT81 388 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 COL25A1Q9BXS0 654 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-201ENST00000309469 PLEKHA1Q9HB21 404 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 CSAG2Q9Y5P2 127 aa18.67■□□□□ 0.58
ATG4D-201ENST00000309469 PHF3Q92576 2039 aaKnown RBP18.67■□□□□ 0.58
ATG4D-201ENST00000309469 A0A0B4J293 547 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TMEM272A0A1B0GTI8 110 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 XRCC3O43542 346 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 APOC1P02654 83 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 B4GALT1P15291 398 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 ARSBP15848 533 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 ZNF20P17024 532 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SLC6A1P30531 599 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 MRPS10P82664 201 aaKnown RBP18.66■□□□□ 0.58
ATG4D-201ENST00000309469 CAMK2BQ13554 666 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 RTP5Q14D33 572 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 ZBTB8BQ8NAP8 495 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-201ENST00000309469 OR52I2Q8NH67 350 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 FNDC9Q8TBE3 224 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 FAM71F1Q96KD3 344 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-201ENST00000309469 PRRG4Q9BZD6 226 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 KCNK15Q9H427 330 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 LDAHQ9H6V9 325 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TMEM138Q9NPI0 162 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 PARPBPQ9NWS1 579 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 PTPRBP23467 1997 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 CNTRLQ7Z7A1 2325 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 CENPXA8MT69 81 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 E9PLN8 166 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 ORC5O43913 435 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 CTAG2O75638 210 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TRAPPC2P0DI81 140 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TRAPPC2BP0DI82 140 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 RAB3AP20336 220 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 GDNFP39905 211 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SLC6A9P48067 706 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 CLN3Q13286 438 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 RAB35Q15286 201 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TSPO2Q5TGU0 170 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 TUSC5Q8IXB3 177 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SLC22A24Q8N4F4 322 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 FCAMRQ8WWV6 532 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SLC7A6Q92536 515 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 GCDHQ92947 438 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SPTSSAQ969W0 71 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 UPRTQ96BW1 309 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 MARVELD1Q9BSK0 173 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 SLCO5A1Q9H2Y9 848 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 EXO5Q9H790 373 aa18.66■□□□□ 0.58
ATG4D-201ENST00000309469 C5orf63A6NC05 138 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 HMX3A6NHT5 357 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 SGCEO43556 437 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 KRT33AO76009 404 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 IGLV3-1P01715 115 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 ABOP16442 354 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 SCRN3Q0VDG4 424 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 KLF9Q13886 244 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-201ENST00000309469 C3AR1Q16581 482 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 GFOD2Q3B7J2 385 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 IGFL2Q6UWQ7 119 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 OR6F1Q8NGZ6 308 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 SORCS2Q96PQ0 1159 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 LINC00470Q9BZP3 86 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 ZDHHC11Q9H8X9 412 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 RNF122Q9H9V4 155 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 DIABLOQ9NR28 239 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 RHBDD3Q9Y3P4 386 aa18.65■□□□□ 0.58
ATG4D-201ENST00000309469 TRGV5A0A0B4J1U4 118 aa18.64■□□□□ 0.58
ATG4D-201ENST00000309469 M0R135 149 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms