RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 C4orf45Q96LM5 186 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
PTPN9-201ENST00000306726 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 GAREM1Q9H706 876 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 TMEM14AQ9Y6G1 99 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 UPK3AO75631 287 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 DIRAS3O95661 229 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 RAB38P57729 211 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 ELAVL1Q15717 326 aaKnown RBP13.07□□□□□ -0.32
PTPN9-201ENST00000306726 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 TMEM104Q8NE00 496 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 OR4K17Q8NGC6 315 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 PIGTQ969N2 578 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 CCNOP22674 350 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 AGTR1P30556 359 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 RABIFP47224 123 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 GLO1Q04760 184 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 LANCL3Q6ZV70 420 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF679Q8IYX0 411 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 SLC26A10Q8NG04 563 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 NBASA2RRP1 2371 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 HSPB6O14558 160 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 LRP3O75074 770 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 NKX2-2O95096 273 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 F10P00742 488 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 OR13C7P0DN81 318 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 SPP1P10451 314 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 RAB3AP20336 220 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 SLC17A1Q14916 467 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 LINC01590Q5TEZ4 76 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 MEX3BQ6ZN04 569 aaKnown RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 MAMDC2Q7Z304 686 aaPredicted RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 DTWD2Q8NBA8 298 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 AKR1E2Q96JD6 320 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 TMEM184BQ9Y519 407 aaPredicted RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 RHPN2P1A8MT19 583 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF354AO60765 605 aaPredicted RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 CPT2P23786 658 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 RASGEF1BQ0VAM2 473 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 INPP5JQ15735 1006 aaPredicted RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ANKRD16Q6P6B7 361 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 FAM57BQ71RH2 274 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 REEP6Q96HR9 211 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 EHFQ9NZC4 300 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 COPS7AQ9UBW8 275 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 K7ESF4 209 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 AK1P00568 194 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ARG1P05089 322 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 GLRA1P23415 457 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ELOCQ15369 112 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 C11orf87Q6NUJ2 197 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 OR2AJ1Q8NGZ0 328 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ARL11Q969Q4 196 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 STACQ99469 402 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 PRRX2Q99811 253 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
PTPN9-201ENST00000306726 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 ATPIF1Q9UII2 106 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 OR52A1Q9UKL2 312 aa13.06□□□□□ -0.32
PTPN9-201ENST00000306726 TXNDC12O95881 172 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 CD27P26842 260 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 BIDP55957 195 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 ACY1Q03154 408 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 TSPO2Q5TGU0 170 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 SVBPQ8N300 66 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 OR51T1Q8NGJ9 327 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 CNTD2Q9H8S5 307 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 KLHL13Q9P2N7 655 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 KLK13Q9UKR3 277 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 FBXO7Q9Y3I1 522 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 C1QL1O75973 258 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 ADH6P28332 368 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 CD1CP29017 333 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF117Q03924 483 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 KIAA2026Q5HYC2 2103 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 C1orf210Q8IVY1 113 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 C17orf78Q8N4C9 275 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 C19orf47Q8N9M1 422 aaKnown RBP13.05□□□□□ -0.32
PTPN9-201ENST00000306726 OR6N1Q8NGY5 312 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 SHARPINQ9H0F6 387 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF98A6NK75 572 aa13.05□□□□□ -0.32
PTPN9-201ENST00000306726 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms