RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ETV7Q9Y603 341 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 C7orf77A4D0Y5 90 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 DNAJB6O75190 326 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 OR2C1O95371 312 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 H2AFB1P0C5Y9 115 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 CALCBP10092 127 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 TDGF1P13385 188 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 PSMB6P28072 239 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 CYCSP99999 105 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 RAB11BQ15907 218 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 EXOSC6Q5RKV6 272 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 MRM1Q6IN84 353 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 ARHGAP11AQ6P4F7 1023 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 GALNT16Q8N428 558 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 OR5M8Q8NGP6 311 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 SECTM1Q8WVN6 248 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 CPNE4Q96A23 557 aaPredicted RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 PELI1Q96FA3 418 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 ZNF559Q9BR84 538 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 RAB33BQ9H082 229 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 MKKSQ9NPJ1 570 aaPredicted RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 CEP250Q9BV73 2442 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 GLSO94925 669 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 SLC35E2P0CK97 266 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 TMIGD3P0DMS9 266 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 IL12BP29460 328 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 CAMLGP49069 296 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 HSD17B7P56937 341 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 C17orf82Q86X59 251 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 CDRT4Q8N9R6 151 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 STT3BQ8TCJ2 826 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 SLC41A2Q96JW4 573 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 INTS14Q96SY0 518 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 SEC61A2Q9H9S3 476 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 CMC2Q9NRP2 79 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 LOXL2Q9Y4K0 774 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 XIRP2A4UGR9 3374 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 A0A087WZY1 265 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 A0A1W2PS29 197 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 CDC42EP2O14613 210 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 TOX3O15405 576 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 TBX6O95947 436 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 OR2T7P0C7T2 308 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OR8G3PP0DMU2 310 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 CCL4P13236 92 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 TAS2R60P59551 318 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 RAB4BP61018 213 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OR2A2Q6IF42 318 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OR2T27Q8NH04 317 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 PFN4Q8NHR9 129 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 EDARADDQ8WWZ3 215 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 GTF3AQ92664 365 aaKnown RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 TSLPQ969D9 159 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 SLC25A38Q96DW6 304 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 CMTM3Q96MX0 182 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OCSTAMPQ9BR26 566 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 DTX4Q9Y2E6 619 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 GPR55Q9Y2T6 319 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 PCDHGA1Q9Y5H4 931 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 TPRP12270 2363 aaKnown RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 TVP23AA6NH52 213 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 ADAM10O14672 748 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 GMFGO60234 142 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 LRP3O75074 770 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 SLC34A2O95436 690 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 FAM199XQ6PEV8 388 aaPredicted RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 Q6ZRG5 221 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 PEG10Q86TG7 708 aaKnown RBP9.81□□□□□ -0.84
LSM3-201ENST00000306024 TEX19Q8NA77 164 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 SFXN5Q8TD22 340 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 OR7D2Q96RA2 312 aa9.81□□□□□ -0.84
LSM3-201ENST00000306024 BLACEA4D250 179 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 COLCA2A8K830 154 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 UMAD1C9J7I0 102 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 DDTP30046 118 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 TRHRP34981 398 aaPredicted RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 POU3F4P49335 361 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 RPS15P62841 145 aaKnown RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 TRA2AQ13595 282 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSM3-201ENST00000306024 TRIP6Q15654 476 aaKnown RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 TGIF2LXQ8IUE1 241 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 CDS1Q92903 461 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ZG16BQ96DA0 208 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ARSGQ96EG1 525 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 RCC2Q9P258 522 aaKnown RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 TMEM235A6NFC5 223 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ZNF587BE7ETH6 402 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 FOXS1O43638 330 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 SCGB1D2O95969 90 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 CCKBRP32239 447 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 OTX2P32243 289 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 CLDN6P56747 220 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 RAP1AP62834 184 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ZNF85Q03923 595 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ZNF345Q14585 488 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 PXKQ7Z7A4 578 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms