RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 GINS3Q9BRX5 216 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 NUMBLQ9Y6R0 609 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 PRSS37A4D1T9 235 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 HMSDA8MTL9 139 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ARRB2P32121 409 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 FAHD2BQ6P2I3 314 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-201ENST00000302516 SLAMF6Q96DU3 332 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 FAHD2AQ96GK7 314 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 COL24A1Q17RW2 1714 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 MMP7P09237 267 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-201ENST00000302516 FPR2P25090 351 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 SELENBP1Q13228 472 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 Q8IYB0 196 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 CYSLTR2Q9NS75 346 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 HCFC1R1Q9NWW0 138 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 CHD5Q8TDI0 1954 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 CCDC187A0A096LP49 1063 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ANKRD61A6NGH8 418 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 BCAT2O15382 392 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-201ENST00000302516 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 C17orf99Q6UX52 265 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 SLC16A11Q8NCK7 471 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF740Q8NDX6 193 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ARHGDIGQ99819 225 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 LMAN1LQ9HAT1 526 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 OR8G1Q15617 311 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 LSRQ86X29 649 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ARIH2OSQ8N7S6 290 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 OR10P1Q8NGE3 313 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 BADQ92934 168 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 H0Y8G0 127 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 TERTO14746 1132 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 NRASP01111 189 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SDHBP21912 280 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 C11orf87Q6NUJ2 197 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PAQR9Q6ZVX9 377 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 TSEN54Q7Z6J9 526 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF511Q8NB15 262 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ZNRF4Q8WWF5 429 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SLC39A7Q92504 469 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 HGDQ93099 445 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 REEP6Q96HR9 211 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 FER1L6-AS2Q96M78 137 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 RNF186Q9NXI6 227 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SLCO1B1Q9Y6L6 691 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PAPPA2Q9BXP8 1791 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 GLI3P10071 1580 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SOX15O60248 233 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PVRP15151 417 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 KIR2DS2P43631 304 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SLC25A1P53007 311 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 RACK1P63244 317 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SMIM21Q3B7S5 101 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 OR5M10Q6IEU7 315 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM207Q6UWW9 146 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 MRPL43Q8N983 215 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 EDARADDQ8WWZ3 215 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 LHX4Q969G2 390 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 MRGPRX4Q96LA9 322 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 HINT3Q9NQE9 182 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SLC25A37Q9NYZ2 338 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 KIF26BQ2KJY2 2108 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PTHLHP12272 177 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 RPA2P15927 270 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ABCD3P28288 659 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 DUSP5Q16690 384 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SDF2Q99470 211 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF426Q9BUY5 554 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 RAB18Q9NP72 206 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 CGGBP1Q9UFW8 167 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 CST4P01036 141 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 CD22P20273 847 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 FZD2Q14332 565 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 LIPNQ5VXI9 398 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 LAIR1Q6GTX8 287 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PPP1R1CQ8WVI7 109 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PP6455Q8WZ26 134 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 HHIPQ96QV1 700 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 FBXO34Q9NWN3 711 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 DAPP1Q9UN19 280 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 BOLA1Q9Y3E2 137 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 HIST1H3AP68431 136 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 HYAL4Q2M3T9 481 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 CDONQ4KMG0 1287 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 SLC17A4Q9Y2C5 497 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 COL5A3P25940 1745 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 TBXA2RP21731 343 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 MDH2P40926 338 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 CYB561P49447 251 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PIGPP57054 158 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ERHP84090 104 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 VWA2Q5GFL6 755 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 DGAT2L6Q6ZPD8 337 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PRSS42Q7Z5A4 293 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 BCDIN3DQ7Z5W3 292 aaKnown RBP6.95□□□□□ -1.3
SF3B3-201ENST00000302516 C12orf76Q8N812 135 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms