RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LYPD6Q86Y78 171 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 SKA3Q8IX90 412 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 FGFBP3Q8TAT2 258 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 RAB40AQ8WXH6 277 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 FAM3DQ96BQ1 224 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 HAVCR1Q96D42 359 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 PGAM5Q96HS1 289 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 KLK13Q9UKR3 277 aa19.54■□□□□ 0.72
SMAD1-201ENST00000302085 TFECO14948 347 aaPredicted RBP19.53■□□□□ 0.72
SMAD1-201ENST00000302085 SYNGR3O43761 229 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 INPP1P49441 399 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 RAB35Q15286 201 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 RNPS1Q15287 305 aaKnown RBP19.53■□□□□ 0.72
SMAD1-201ENST00000302085 GLYATL3Q5SZD4 288 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF774Q6NX45 483 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 NEURL2Q9BR09 285 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 SLC17A5Q9NRA2 495 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 CTDSPLO15194 276 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 WISP2O76076 250 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 IGHG3P01860 377 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 TMIGD3P0DMS9 266 aaPredicted RBP19.53■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF32P17041 273 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 CRYGSP22914 178 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 GNALP38405 381 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 KIR2DL3P43628 341 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 POU3F4P49335 361 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 EFNB2P52799 333 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF57Q68EA5 555 aaPredicted RBP19.53■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF529Q6P280 563 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF813Q6ZN06 617 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 COMMD2Q86X83 199 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 OR1M1Q8NGA1 313 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 YIPF5Q969M3 257 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 LYZL4Q96KX0 146 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 KCNK15Q9H427 330 aa19.53■□□□□ 0.72
SMAD1-201ENST00000302085 KLK10O43240 276 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 LYRM1O43325 122 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 GSTZ1O43708 216 aaPredicted RBP19.52■□□□□ 0.72
SMAD1-201ENST00000302085 TGM6O95932 706 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 IGLV3-1P01715 115 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 ABOP16442 354 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF24P17028 368 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 MAP2K3P46734 347 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 SLC6A9P48067 706 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 PTH2RP49190 550 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RNASE12Q5GAN4 147 aaKnown RBP19.52■□□□□ 0.72
SMAD1-201ENST00000302085 C1orf100Q5SVJ3 147 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 NUFIP2Q7Z417 695 aaKnown RBP19.52■□□□□ 0.72
SMAD1-201ENST00000302085 ZNF554Q86TJ5 538 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 OR5D14Q8NGL3 314 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 OR1F12Q8NHA8 337 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 PPP1R14BQ96C90 147 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 FAM71F1Q96KD3 344 aaPredicted RBP19.52■□□□□ 0.72
SMAD1-201ENST00000302085 MMP28Q9H239 520 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RABL2AQ9UBK7 228 aaPredicted RBP19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RABL2BQ9UNT1 228 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RHBDD3Q9Y3P4 386 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 TIMM10BQ9Y5J6 103 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RTTNQ86VV8 2226 aa19.52■□□□□ 0.72
SMAD1-201ENST00000302085 RPL36A-HNRNPH2H7BZ11 118 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 M0R135 149 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 CD3GP09693 182 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 CDK2P24941 298 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 HTR2CP28335 458 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 BDKRB2P30411 391 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 ARF1P84077 181 aaKnown RBP19.52■□□□□ 0.71
SMAD1-201ENST00000302085 PSG4Q00888 419 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 SCRN3Q0VDG4 424 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 GFOD2Q3B7J2 385 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 SLC36A2Q495M3 483 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 DOK3Q7L591 496 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 SLC16A14Q7RTX9 510 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 MCEMP1Q8IX19 187 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 SPTSSAQ969W0 71 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF799Q96GE5 643 aa19.52■□□□□ 0.71
SMAD1-201ENST00000302085 LOC100289279A0A1B0GTE1 492 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 LOC390937A0A1W2PQ73 354 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 MZT2BQ6NZ67 158 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 MTFR2Q6P444 385 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 BIVMQ86UB2 503 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 JAGN1Q8N5M9 183 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 OR14K1Q8NGZ2 314 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 AKR7LQ8NHP1 331 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 OR2H1Q9GZK4 316 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 WNT5BQ9H1J7 359 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 RBFOX1Q9NWB1 397 aaKnown RBP19.51■□□□□ 0.71
SMAD1-201ENST00000302085 CUL9Q8IWT3 2517 aa19.51■□□□□ 0.71
SMAD1-201ENST00000302085 CELSR3Q9NYQ7 3312 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 OR6C6A6NF89 314 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 APOC1P02654 83 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 FAM157BP0CG42 384 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF20P17024 532 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 FOXG1P55316 489 aaPredicted RBP19.5■□□□□ 0.71
SMAD1-201ENST00000302085 ECH1Q13011 328 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 RSPO4Q2I0M5 234 aaPredicted RBP19.5■□□□□ 0.71
SMAD1-201ENST00000302085 KRTAP27-1Q3LI81 207 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 NKAIN3Q8N8D7 197 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 OR52N4Q8NGI2 321 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 OR6M1Q8NGM8 313 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 APH1AQ96BI3 265 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms