RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FAM157AC9JC47 383 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 KLF8O95600 359 aaPredicted RBP12.93□□□□□ -0.34
CDT1-201ENST00000301019 DIRAS3O95661 229 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 UBE2V2Q15819 145 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 WDR38Q5JTN6 314 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 ZNF880Q6PDB4 577 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 BTNL8Q6UX41 500 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
CDT1-201ENST00000301019 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 PRSS35Q8N3Z0 413 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 SUMF2Q8NBJ7 301 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 SNHG12Q9BXW3 62 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 ETV7Q9Y603 341 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 DENND4CQ5VZ89 1909 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 KIF26BQ2KJY2 2108 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 GLRA1P23415 457 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 FCGR2CP31995 323 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 GNALP38405 381 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 TMEM33P57088 247 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 CCL20P78556 96 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 B9D1Q9UPM9 204 aa12.93□□□□□ -0.34
CDT1-201ENST00000301019 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
CDT1-201ENST00000301019 UPK3AO75631 287 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CD37P11049 281 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 TIMP2P16035 220 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 PPICP45877 212 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 DBX2Q6ZNG2 339 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 COX15Q7KZN9 410 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 SLC25A42Q86VD7 318 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CRIPAKQ8N1N5 446 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 LINC01555Q8NAE3 123 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 NPEPL1Q8NDH3 523 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CCDC74BQ96LY2 380 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CASD1Q96PB1 797 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 LPAR4Q99677 370 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CCL26Q9Y258 94 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 LAMA1P25391 3075 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 A0A0A6YYD5 115 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 OMGP23515 440 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 PAX6P26367 422 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 HTR2CP28335 458 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 GABRA4P48169 554 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 FAM53BQ14153 422 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 RTL6Q6ICC9 239 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 VITQ6UXI7 678 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 MAML2Q8IZL2 1156 aaPredicted RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 NDUFB2O95178 105 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 EIF1AXP47813 144 aaKnown RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 CSNK1G2P78368 415 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 HNF4GQ14541 408 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 PTCRAQ6ISU1 281 aaPredicted RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 ULK3Q6PHR2 472 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CLEC18BQ6UXF7 455 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
CDT1-201ENST00000301019 MESP1Q9BRJ9 268 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 PDE7BQ9NP56 450 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 CKLFQ9UBR5 152 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 KCNK6Q9Y257 313 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 GOLT1BQ9Y3E0 138 aa12.92□□□□□ -0.34
CDT1-201ENST00000301019 ARHGAP21Q5T5U3 1957 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 PLXNA3P51805 1871 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 K7EPK0 472 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 PNPP00491 289 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 CTSAP10619 480 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 TFPI2P48307 235 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 NHLH2Q02577 135 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 TEX30Q5JUR7 227 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 DCST2Q5T1A1 773 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
CDT1-201ENST00000301019 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 RNF144BQ7Z419 303 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 FAM71E2Q8N5Q1 922 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 TRAM1L1Q8N609 369 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 C2orf88Q9BSF0 95 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 SLC5A7Q9GZV3 580 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 HDGFL3Q9Y3E1 203 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 FREM3P0C091 2139 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 IGKV1-8A0A0C4DH67 115 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 LDLRAD4O15165 306 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 RDH16O75452 317 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 NXPH3O95157 252 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 MESTQ5EB52 335 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
CDT1-201ENST00000301019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDT1-201ENST00000301019 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms