RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PRAMEF26H0Y7S4 382 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 HIST1H1CP16403 213 aaKnown RBP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 SUB1P53999 127 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 PKIAP61925 76 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 RNASEKQ6P5S7 137 aaKnown RBP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 GJC3Q8NFK1 279 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 NSG1A0A0A6YYJ2 146 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF814B7Z6K7 855 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 CTSLP07711 333 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 RFC3P40938 356 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 C11orf87Q6NUJ2 197 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 RFLNAQ6ZTI6 216 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 PGBD5Q8N414 524 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 MUCL1Q96DR8 90 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 SLC35A4Q96G79 324 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 GSX1Q9H4S2 264 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 NOVA1P51513 510 aaKnown RBP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 GPNMBQ14956 572 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 ORAI1Q96D31 301 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 GUSBP08236 651 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 AMTP48728 403 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 LCORQ96JN0 433 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-201ENST00000299333 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 PDLIM7Q9NR12 457 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 FBXO4Q9UKT5 387 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 MYH11P35749 1972 aa13.54□□□□□ -0.24
SCN3B-201ENST00000299333 CEBPBP17676 345 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 DRAM2Q6UX65 266 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 TRAF4Q9BUZ4 470 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 MMP26Q9NRE1 261 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 PYCARD-AS1I3L0S3 204 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 AP4M1O00189 453 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF217O75362 1048 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 POU3F3P20264 500 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 CSNK1DP48730 415 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 PIGPP57054 158 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 C1orf140Q5VVS0 124 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 OR51F2Q8NH61 342 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 BOKQ9UMX3 212 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 GNB1P62873 340 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 SLC25A35Q3KQZ1 300 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 CYHR1Q6ZMK1 362 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 MISPQ8IVT2 679 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 ISG20L2Q9H9L3 353 aaKnown RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF835Q9Y2P0 537 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 NUMBLQ9Y6R0 609 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
SCN3B-201ENST00000299333 CTXN2P0C2S0 81 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 GALR1P47211 349 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 C17orf67Q0P5P2 114 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 STAC2Q6ZMT1 411 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 FA2HQ7L5A8 372 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 OR2M7Q8NG81 312 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 MCHR2Q969V1 340 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 YIF1AO95070 293 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 DMWDQ09019 674 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
SCN3B-201ENST00000299333 TCRBV5S2A0A599 114 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 B3GALT4O96024 378 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 AVPR2P30518 371 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 IRS1P35568 1242 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 PFN3P60673 137 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 XKR7Q5GH72 579 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.24
SCN3B-201ENST00000299333 DGAT2L6Q6ZPD8 337 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 ADPRHL1Q8NDY3 354 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 GPX8Q8TED1 209 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.24
SCN3B-201ENST00000299333 SIGLEC6O43699 453 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 SPINK4O60575 86 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 PIAS2O75928 621 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 OR2J2O76002 312 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 PSMB2P49721 201 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 GPR32P1Q8NGA4 272 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
SCN3B-201ENST00000299333 STACQ99469 402 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 EMC6Q9BV81 110 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 CMC2Q9NRP2 79 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 TTC32Q5I0X7 151 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 GLDNQ6ZMI3 551 aaPredicted RBP13.52□□□□□ -0.25
SCN3B-201ENST00000299333 OR2A1Q8NGT9 310 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 NUMA1Q14980 2115 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 H3BP45 60 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 SCGB1A1P11684 91 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms