RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CALHM2Q9HA72 323 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 P4HTMQ9NXG6 502 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 U3KQA8 63 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 FRYQ5TBA9 3013 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 FAM221AA4D161 298 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF878C9JN71 531 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 SDCBPO00560 298 aaPredicted RBP8.26□□□□□ -1.09
PRDM9-201ENST00000296682 CTDSPLO15194 276 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 SLC22A5O76082 557 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 CCL2P13500 99 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF24P17028 368 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 S100A1P23297 94 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 TGIF1Q15583 401 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 ABHD17BQ5VST6 288 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 RTN4RL2Q86UN3 420 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 CYYR1Q96J86 154 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 MNTQ99583 582 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 MED13Q9UHV7 2174 aa8.26□□□□□ -1.09
PRDM9-201ENST00000296682 FTCDNL1E5RQL4 147 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 STMND1H3BQB6 276 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 SLC17A2O00624 439 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ANGPTL7O43827 346 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 NPIPB7O75200 414 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 GLSO94925 669 aaPredicted RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 UMODP07911 640 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 RFPL3SP0C7P2 107 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 POU3F2P20265 443 aaPredicted RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 BTCP35070 178 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 DLSTP36957 453 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR3A3P47888 321 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR3A2P47893 321 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 SLC35A1P78382 337 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 IL11RAQ14626 422 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 GPR137CQ8N3F9 429 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF441Q8N8Z8 693 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 BHLHE23Q8NDY6 225 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR11H4Q8NGC9 324 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 NTNG2Q96CW9 530 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ARL6Q9H0F7 186 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 LRFN1Q9P244 771 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 C5orf63A6NC05 138 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 C1QBP02746 253 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 RAF1P04049 648 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 FCGR2AP12318 317 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF35P13682 527 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 CYB561P49447 251 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZXDAP98168 799 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 BAMBIQ13145 260 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 TNK1Q13470 666 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 KLF9Q13886 244 aaPredicted RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 PCOLCEQ15113 449 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 AAED1Q7RTV5 226 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 TCTE3Q8IZS6 198 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF454Q8N9F8 522 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR51T1Q8NGJ9 327 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR2Y1Q8NGV0 311 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 HGDQ93099 445 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF845Q96IR2 970 aaPredicted RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OR2M2Q96R28 347 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 CRLF2Q9HC73 371 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 COPZ2Q9P299 210 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 FREM1Q5H8C1 2179 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 A0A0J9YW62 118 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 XRCC3O43542 346 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 RGS11O94810 467 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 AKAIN1P0CW23 69 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 MSX1P28360 303 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 THEM4Q5T1C6 240 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ATP1A1-AS1Q5TC04 95 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 CDH24Q86UP0 819 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 BEST3Q8N1M1 668 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 LILRB4Q8NHJ6 448 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 OXGR1Q96P68 337 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 NICN1Q9BSH3 213 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 TGIF2Q9GZN2 237 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 PRO3102Q9H379 93 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 LDAHQ9H6V9 325 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 CA10Q9NS85 328 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
PRDM9-201ENST00000296682 ZNF230Q9UIE0 474 aaPredicted RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 MRPS28Q9Y2Q9 187 aaKnown RBP8.25□□□□□ -1.09
PRDM9-201ENST00000296682 M0R233 179 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 TOX3O15405 576 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 GSTZ1O43708 216 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 KNG1P01042 644 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 TTRP02766 147 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 RGS19P49795 217 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 SFRP5Q5T4F7 317 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OLFML2AQ68BL7 652 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 C6orf15Q6UXA7 325 aaPredicted RBP8.24□□□□□ -1.09
PRDM9-201ENST00000296682 CATSPERDQ86XM0 798 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 C20orf196Q8IYI0 205 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OR1M1Q8NGA1 313 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 OR1J2Q8NGS2 313 aa8.24□□□□□ -1.09
PRDM9-201ENST00000296682 RADILQ96JH8 1075 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms