RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CCDC32Q9BV29 185 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 COMMD3Q9UBI1 195 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 GTF2A1LQ9UNN4 478 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 PCDHGA9Q9Y5G4 932 aaKnown RBP13.69□□□□□ -0.22
LSM6-201ENST00000296581 PDCD5O14737 125 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 RER1O15258 196 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 ISG15P05161 165 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 NPR2P20594 1047 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 SOX2P48431 317 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 RNPS1Q15287 305 aaKnown RBP13.69□□□□□ -0.22
LSM6-201ENST00000296581 SLC25A35Q3KQZ1 300 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 LINGO2Q7L985 606 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 LINC00470Q9BZP3 86 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 CRLF2Q9HC73 371 aa13.69□□□□□ -0.22
LSM6-201ENST00000296581 EPXP11678 715 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 APEX1P27695 318 aaKnown RBP13.68□□□□□ -0.22
LSM6-201ENST00000296581 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
LSM6-201ENST00000296581 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSM6-201ENST00000296581 ZNF704Q6ZNC4 412 aaPredicted RBP13.68□□□□□ -0.22
LSM6-201ENST00000296581 GJC3Q8NFK1 279 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 TMEM106AQ96A25 262 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 GFI1Q99684 422 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 PRRG4Q9BZD6 226 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 TMEM38BQ9NVV0 291 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 PARPBPQ9NWS1 579 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
LSM6-201ENST00000296581 ZNF175Q9Y473 711 aa13.68□□□□□ -0.22
LSM6-201ENST00000296581 A0A1B0GVC2 190 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 MRPL33O75394 65 aaKnown RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 HOXD4P09016 255 aaPredicted RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 ACHEP22303 614 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 CTSSP25774 331 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 RIN1Q13671 783 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 BCL2L15Q5TBC7 163 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 PLXDC2Q6UX71 529 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 CHMP1BQ7LBR1 199 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 TUSC5Q8IXB3 177 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 ALKBH3Q96Q83 286 aaPredicted RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 SLC25A18Q9H1K4 315 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 SLCO5A1Q9H2Y9 848 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 SLC23A1Q9UHI7 598 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 HPGDSO60760 199 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 UBCP0CG48 685 aaKnown RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 GRB2P62993 217 aaKnown RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 TMEM244Q5VVB8 128 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 STAC2Q6ZMT1 411 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 LRRTM1Q86UE6 522 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
LSM6-201ENST00000296581 DIRAS2Q96HU8 199 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 PRDM14Q9GZV8 571 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 PPA2Q9H2U2 334 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 TCF7L1Q9HCS4 588 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 HHLA2Q9UM44 414 aa13.67□□□□□ -0.22
LSM6-201ENST00000296581 OR6C65A6NJZ3 312 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 SLC19A2O60779 497 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 TMEM127O75204 238 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 CST2P09228 141 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 SLC2A2P11168 524 aaPredicted RBP13.66□□□□□ -0.22
LSM6-201ENST00000296581 ATF1P18846 271 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 HSD11B1P28845 292 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 HAAOP46952 286 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 TAF13Q15543 124 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 CEACAM16Q2WEN9 425 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ZBTB37Q5TC79 503 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ASB5Q8WWX0 329 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 PBOV1Q9GZY1 135 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ABRACLQ9P1F3 81 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 DHDHQ9UQ10 334 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 CAMK2AQ9UQM7 478 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 LOC107986453A0A1B0GWG9 222 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 TTRP02766 147 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ZNF79Q15937 498 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 LAMTOR1Q6IAA8 161 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 LRRC18Q8N456 261 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 FBXO17Q96EF6 278 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 FOXB1Q99853 325 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 SOSTQ9BQB4 213 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 MMP28Q9H239 520 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 ADAM30Q9UKF2 790 aa13.66□□□□□ -0.22
LSM6-201ENST00000296581 TRAV8-7A0A075B6U6 113 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 DLL1O00548 723 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 AQP7O14520 342 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 C1QBP02746 253 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ADRA2CP18825 462 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 EVX1P49640 407 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 METAP1DQ6UB28 335 aaPredicted RBP13.65□□□□□ -0.22
LSM6-201ENST00000296581 Q6ZS92 163 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms