RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SCP2D1Q9UJQ7 156 aa10.41□□□□□ -0.74
RHO-201ENST00000296271 FREM1Q5H8C1 2179 aa10.41□□□□□ -0.74
RHO-201ENST00000296271 LAMA5O15230 3695 aa10.41□□□□□ -0.74
RHO-201ENST00000296271 DOCK7Q96N67 2140 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 A0A0J9YW62 118 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 AQP7P3A6NL99 342 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 RAB27BO00194 218 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 RGS11O94810 467 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 AKAIN1P0CW23 69 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ZNF35P13682 527 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 CFPP27918 469 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 BDKRB2P30411 391 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 OR3A4PP47883 348 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 GABREP78334 506 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 RBMS2Q15434 407 aaKnown RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 SFRP5Q5T4F7 317 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 TIPARPQ7Z3E1 657 aaKnown RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 RPS19BP1Q86WX3 136 aaKnown RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 OR2AJ1Q8NGZ0 328 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 SLC6A7Q99884 636 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 POFUT1Q9H488 388 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 EXO5Q9H790 373 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 FANCFQ9NPI8 374 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ZNF230Q9UIE0 474 aaPredicted RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 MED13Q9UHV7 2174 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 NSG1A0A0A6YYJ2 146 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 CCDC163A0A0D9SF12 145 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ZNF726A6NNF4 738 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 F5H5K5 113 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 GOSR2O14653 212 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 TP53I11O14683 189 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 RAB3DO95716 219 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 AMY2AP04746 511 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 TPOP07202 933 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 CSF1P09603 554 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 PATE4P0C8F1 98 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 UBCP0CG48 685 aaKnown RBP10.4□□□□□ -0.74
RHO-201ENST00000296271 GABRA1P14867 456 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 RFC3P40938 356 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 GRK1Q15835 563 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 C1orf100Q5SVJ3 147 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 IDO2Q6ZQW0 420 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ANGPTL5Q86XS5 388 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 OR2Y1Q8NGV0 311 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 OR6X1Q8NH79 312 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 SORCS2Q96PQ0 1159 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ZNF700Q9H0M5 742 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 WDR54Q9H977 334 aa10.4□□□□□ -0.74
RHO-201ENST00000296271 ZNF407Q9C0G0 2248 aa10.4□□□□□ -0.75
RHO-201ENST00000296271 A0A0A6YYD4 124 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 LOC390937A0A1W2PQ73 354 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 NPIPB13A6NJU9 1138 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 NPIPB4C9JG80 1138 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 CD63P08962 238 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 ZNF735P0CB33 412 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 LIFP15018 202 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 HOXA6P31267 233 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 CX3CR1P49238 355 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 SSR4P51571 173 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 ZXDAP98168 799 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 MC2RQ01718 297 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 EXOSC2Q13868 293 aaKnown RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 C4orf46Q504U0 113 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 LIN54Q6MZP7 749 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 TMEM81Q6P7N7 255 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 FJX1Q86VR8 437 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 OR5AS1Q8N127 324 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 ZNF283Q8N7M2 679 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 OR6N1Q8NGY5 312 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 LYZL4Q96KX0 146 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 SELENOIQ9C0D9 397 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 TMEM138Q9NPI0 162 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 DMXL1Q9Y485 3027 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 ZNF878C9JN71 531 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 CD37P11049 281 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 QRFPP83859 136 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 H3F3AP84243 136 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 HIST3H3Q16695 136 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 RSPO1Q2MKA7 263 aaPredicted RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 DEGS2Q6QHC5 323 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 C1QL2Q7Z5L3 287 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 MRGPRFQ96AM1 343 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 ELMOD3Q96FG2 381 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 UTP23Q9BRU9 249 aaKnown RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 TRAF4Q9BUZ4 470 aaPredicted RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 RBM24Q9BX46 236 aaKnown RBP10.39□□□□□ -0.75
RHO-201ENST00000296271 C1QTNF6Q9BXI9 259 aa10.39□□□□□ -0.75
RHO-201ENST00000296271 BOD1L1Q8NFC6 3051 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 IGKV1-9A0A0C4DH69 117 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 C9J4A7 227 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 TEX46H3BTG2 121 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 SOCS1O15524 211 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 PRAF2O60831 178 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 STK17BO94768 372 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 LPLP06858 475 aa10.38□□□□□ -0.75
RHO-201ENST00000296271 SCAND1P57086 179 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms