RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 CA10Q9NS85 328 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 TCFL5Q9UL49 500 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 PADI1Q9ULC6 663 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 MED12Q93074 2177 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 TPOP07202 933 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 MSR1P21757 451 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 LSM6P62312 80 aaKnown RBP21.18■□□□□ 0.98
TRIM54-201ENST00000296098 CSRP2Q16527 193 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF283Q8N7M2 679 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 OR9K2Q8NGE7 335 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 NKD1Q969G9 470 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF385AQ96PM9 386 aaKnown RBP21.18■□□□□ 0.98
TRIM54-201ENST00000296098 CHIAQ9BZP6 476 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 RYDENQ9NUL5 291 aaKnown RBP21.18■□□□□ 0.98
TRIM54-201ENST00000296098 TECTAO75443 2155 aa21.18■□□□□ 0.98
TRIM54-201ENST00000296098 UBE2QL1A1L167 161 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 ANKRD34BA5PLL1 514 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 RAB3DO95716 219 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 GIPP09681 153 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF883P0CG24 379 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 GUCA1AP43080 201 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 RAC1P63000 192 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 HYAL4Q2M3T9 481 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 CDH26Q8IXH8 852 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 OR52B4Q8NGK2 314 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 FAM46BQ96A09 425 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 ZMAT3Q9HA38 289 aaKnown RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 GPR84Q9NQS5 396 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 EIF3KQ9UBQ5 218 aaKnown RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 SLC5A6Q9Y289 635 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 KIAA1549Q9HCM3 1950 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 TMEM235A6NFC5 223 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 GJE1A6NN92 205 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 WDPCPO95876 746 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 CYB5AP00167 134 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 MPLP40238 635 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 PER3P56645 1201 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 CHAF1BQ13112 559 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 UNC119Q13432 240 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 PHYHD1Q5SRE7 291 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 C6orf15Q6UXA7 325 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 TMEM123Q8N131 208 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 DTWD2Q8NBA8 298 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 NELFAQ9H3P2 528 aa21.17■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF107Q9UII5 783 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-201ENST00000296098 TNFSF11O14788 317 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 TOXO94900 526 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 P04436 131 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ICAM2P13598 275 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 CCL1P22362 96 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF133P52736 654 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-201ENST00000296098 QRFPP83859 136 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 FAM57BQ71RH2 274 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 PAQR4Q8N4S7 273 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-201ENST00000296098 OR8H1Q8NGG4 311 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 CT55Q8WUE5 264 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 AQP3Q92482 292 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 EXO5Q9H790 373 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 KLK13Q9UKR3 277 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ELF5Q9UKW6 265 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-201ENST00000296098 A0A0J9YW62 118 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ALX3O95076 343 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ABOP16442 354 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 TCN2P20062 427 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF93P35789 620 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-201ENST00000296098 Q0VFX4 171 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 AWAT2Q6E213 333 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 FOXL2NBQ6ZUU3 175 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 PGAP1Q75T13 922 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 FAM71F1Q96KD3 344 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-201ENST00000296098 PIPOXQ9P0Z9 390 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF319Q9P2F9 582 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 UPB1Q9UBR1 384 aa21.16■□□□□ 0.98
TRIM54-201ENST00000296098 A0A0G2JMM0 328 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 A0A1W2PPB8 328 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 A0A1W2PRS3 328 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 KIR3DP1A8MWS1 328 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 ERVH48-1M5A8F1 160 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 RAB27BO00194 218 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 HPP00738 406 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 VSIG8P0DPA2 414 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 ANOS1P23352 680 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF81P51508 661 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 LGALSLQ3ZCW2 172 aaPredicted RBP21.15■□□□□ 0.98
TRIM54-201ENST00000296098 ZBTB37Q5TC79 503 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 DBX2Q6ZNG2 339 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 DOK3Q7L591 496 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 GALNT16Q8N428 558 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 PNPLA2Q96AD5 504 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 SOX7Q9BT81 388 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 STRADBQ9C0K7 418 aa21.15■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF736B4DX44 427 aaPredicted RBP21.14■□□□□ 0.98
TRIM54-201ENST00000296098 M0QYG6 137 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 SCGNO76038 276 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 SRD5A2P31213 254 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 RAP2BP61225 183 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF260Q3ZCT1 412 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF584Q8IVC4 421 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 RADILQ96JH8 1075 aa21.14■□□□□ 0.98
TRIM54-201ENST00000296098 SRXN1Q9BYN0 137 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms