RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 RSBN1Q5VWQ0 802 aaPredicted RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 LINGO2Q7L985 606 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 SIAH3Q8IW03 269 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 SMIM4Q8WVI0 70 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 RAB40AQ8WXH6 277 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 FGGYQ96C11 551 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 INTS12Q96CB8 462 aaKnown RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 ZNF319Q9P2F9 582 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 CGGBP1Q9UFW8 167 aaPredicted RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 N6AMT1Q9Y5N5 214 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 LIPGQ9Y5X9 500 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 CACNG2Q9Y698 323 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 PTHLHP12272 177 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 ZNF121P58317 390 aaPredicted RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 SPOCK1Q08629 439 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 HACD4Q5VWC8 232 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 KRT74Q7RTS7 529 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 OR8B12Q8NGG6 310 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 PNPLA2Q96AD5 504 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 UPRTQ96BW1 309 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 ITPKCQ96DU7 683 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 ADAT3Q96EY9 351 aaPredicted RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 S100A16Q96FQ6 103 aaKnown RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 SOX7Q9BT81 388 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 NELFAQ9H3P2 528 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 LDAHQ9H6V9 325 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 ZNF275Q9NSD4 429 aaPredicted RBP18.43■□□□□ 0.54
YBX3-202ENST00000279550 CKLFQ9UBR5 152 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 TP53TG5Q9Y2B4 290 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 BOD1L1Q8NFC6 3051 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 C5orf63A6NC05 138 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 CX3CR1P49238 355 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 PLET1Q6UQ28 207 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 RHOUQ7L0Q8 258 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 LRRC18Q8N456 261 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 OR1J2Q8NGS2 313 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 OR51E1Q8TCB6 317 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 FAM3DQ96BQ1 224 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 NIPAL2Q9H841 368 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 RCE1Q9Y256 329 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 IGF2RP11717 2491 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 ATMQ13315 3056 aa18.42■□□□□ 0.54
YBX3-202ENST00000279550 SPENQ96T58 3664 aaKnown RBP18.41■□□□□ 0.54
YBX3-202ENST00000279550 TRGV5A0A0B4J1U4 118 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 SYT7O43581 403 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 ACTL6AO96019 429 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 ZNF708P17019 499 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 POU3F4P49335 361 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 EIF2B2P49770 351 aaKnown RBP18.41■□□□□ 0.54
YBX3-202ENST00000279550 CLDN18P56856 261 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 SCAND1P57086 179 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 TAS2R20P59543 309 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 HIST1H3AP68431 136 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 C2orf76Q3KRA6 126 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 PLA1AQ53H76 456 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 HIST2H3PS2Q5TEC6 136 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 HIST2H3AQ71DI3 136 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 AAED1Q7RTV5 226 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 OR52I2Q8NH67 350 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 NPAP1Q9NZP6 1156 aa18.41■□□□□ 0.54
YBX3-202ENST00000279550 CYTIPO60759 359 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 SLC6A1P30531 599 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 KLF9Q13886 244 aaPredicted RBP18.4■□□□□ 0.54
YBX3-202ENST00000279550 CCDC92Q53HC0 331 aaPredicted RBP18.4■□□□□ 0.54
YBX3-202ENST00000279550 TMEM69Q5SWH9 247 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 GLT8D1Q68CQ7 371 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 PLXDC2Q6UX71 529 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 LYPD6Q86Y78 171 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 ZNF283Q8N7M2 679 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 ABHD3Q8WU67 409 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 TAAR6Q96RI8 345 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 EXO5Q9H790 373 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 MOB1AQ9H8S9 216 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 PLEKHA1Q9HB21 404 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 RABL2AQ9UBK7 228 aaPredicted RBP18.4■□□□□ 0.54
YBX3-202ENST00000279550 RABL2BQ9UNT1 228 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 RHBDD3Q9Y3P4 386 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 PTPRQQ9UMZ3 2332 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 ANKRD11Q6UB99 2663 aaPredicted RBP18.4■□□□□ 0.54
YBX3-202ENST00000279550 TMEM272A0A1B0GTI8 110 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 E9PLN8 166 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 IGHG3P01860 377 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 GDNFP39905 211 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 MNDAP41218 407 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 ZNF84P51523 738 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 SRYQ05066 204 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 BCL2A1Q16548 175 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 PDSS1Q5T2R2 415 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 FAM57BQ71RH2 274 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.4■□□□□ 0.54
YBX3-202ENST00000279550 TOMM5Q8N4H5 51 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 FBXO17Q96EF6 278 aa18.4■□□□□ 0.54
YBX3-202ENST00000279550 LOC100289279A0A1B0GTE1 492 aa18.39■□□□□ 0.53
YBX3-202ENST00000279550 A0A1B0GVI7 797 aa18.39■□□□□ 0.53
YBX3-202ENST00000279550 ORC5O43913 435 aa18.39■□□□□ 0.53
YBX3-202ENST00000279550 GUCA1AP43080 201 aaPredicted RBP18.39■□□□□ 0.53
YBX3-202ENST00000279550 GRB2P62993 217 aaKnown RBP18.39■□□□□ 0.53
YBX3-202ENST00000279550 MRPS34P82930 218 aaKnown RBP18.39■□□□□ 0.53
YBX3-202ENST00000279550 GALK2Q01415 458 aa18.39■□□□□ 0.53
YBX3-202ENST00000279550 RSPO1Q2MKA7 263 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms