RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 GMPPBQ9Y5P6 360 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 PDCD11Q14690 1871 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 A0A0A6YYD4 124 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 IGHV2-70DA0A0C4DH43 119 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 GLYATL1P3A0A0U1RQE8 302 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ZCWPW2A0A1B0GU75 182 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 FAM231BA6NCW3 169 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 LILRA5A6NI73 299 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 NKX6-3A6NJ46 265 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 FTCDNL1E5RQL4 147 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PLPP1O14494 284 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 HSD17B6O14756 317 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PPIHO43447 177 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 TGOLN2O43493 480 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 MPZL1O95297 269 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 DHFRP00374 187 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 IGLV3-27P01718 113 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 FGF2P09038 288 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 FAM157CP0CG43 387 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 GABRG2P18507 467 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ATP5A1P25705 553 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 AESQ08117 197 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 RIGQ13278 110 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 SF3A2Q15428 464 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 TAL2Q16559 108 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 POU2AF1Q16633 256 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 DUSP7Q16829 419 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 RFX4Q33E94 735 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 BSXQ3C1V8 233 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ZNF260Q3ZCT1 412 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 CCDC153Q494R4 210 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 TMEM35AQ53FP2 167 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PDZD11Q5EBL8 140 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PIK3CD-AS1Q5SR53 167 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 LPCAT4Q643R3 524 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 DUPD1Q68J44 220 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 LRRN1Q6UXK5 716 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 RAD9BQ6WBX8 426 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ACOT7LQ6ZUV0 252 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 C16orf82Q7Z2V1 217 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 CMC1Q7Z7K0 106 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 NT5DC3Q86UY8 548 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 SLC47A2Q86VL8 602 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PRSS58Q8IYP2 241 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ABHD12Q8N2K0 398 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ATP6V0D2Q8N8Y2 350 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ATP6V1C2Q8NEY4 427 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 OR6K6Q8NGW6 343 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 OR5K2Q8NHB8 316 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 APH1BQ8WW43 257 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 STMN2Q93045 179 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 TADA1Q96BN2 335 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PPWD1Q96BP3 646 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 FLYWCH2Q96CP2 140 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 OMA1Q96E52 524 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 STACQ99469 402 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 RNF2Q99496 336 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 TEAD3Q99594 435 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 PSD2Q9BQI7 771 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ZNF670Q9BS34 389 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 BARHL1Q9BZE3 327 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 GAREM1Q9H706 876 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 MAP6D1Q9H9H5 199 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ACP6Q9NPH0 428 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 ISYNA1Q9NPH2 558 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 SDR39U1Q9NRG7 319 aaPredicted RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 INTS9Q9NV88 658 aaKnown RBP3.86□□□□□ -1.79
CD44-202ENST00000278385 FGFR1OP2Q9NVK5 253 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 DNAJC12Q9UKB3 198 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 TCF19Q9Y242 345 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 USH1CQ9Y6N9 552 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 DOCK6Q96HP0 2047 aa3.86□□□□□ -1.79
CD44-202ENST00000278385 C5orf42Q9H799 3197 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 TRBV5-3A0A0A0MS03 114 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.85□□□□□ -1.79
CD44-202ENST00000278385 IGHV1OR15-9A0A0B4J2B8 117 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 A0A0G2JNG1 304 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 IGLV5-39A0A0G2JS06 123 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 TCRBV9S1A1TA0A576 114 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 ANKRD20A5PA0PJZ0 165 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 TSPAN11A1L157 253 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 C2orf74A8MZ97 194 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 SIGLEC5O15389 551 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 FGF16O43320 207 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 ITM2AO43736 263 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 HPGDSO60760 199 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 TBL1XO60907 577 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 MPDU1O75352 247 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 SRP72O76094 671 aaKnown RBP3.85□□□□□ -1.79
CD44-202ENST00000278385 OXSR1O95747 527 aaPredicted RBP3.85□□□□□ -1.79
CD44-202ENST00000278385 SERPINA1P01009 418 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 JCHAINP01591 159 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 HLA-AP01891 365 aaKnown RBP3.85□□□□□ -1.79
CD44-202ENST00000278385 APOEP02649 317 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 MELTFP08582 738 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 FAM106CPP0CH98 169 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
CD44-202ENST00000278385 THRAP10827 490 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms