RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ITGA5P08648 1049 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 FOLR1P15328 257 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 NDUFB7P17568 137 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 GABRA4P48169 554 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CCR4P51679 360 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CLINT1Q14677 625 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 C2orf76Q3KRA6 126 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 FAM220AQ7Z4H9 259 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZBTB8AQ96BR9 441 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 MEGF10Q96KG7 1140 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ADAD1Q96M93 576 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ALG12Q9BV10 488 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 POTEKPQ9BYX7 375 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PCDHGA1Q9Y5H4 931 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CDC14CA4D256 554 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ARGFXA6NJG6 315 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 A6NLC8 198 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 C17orf105B2RV13 164 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PPIHO43447 177 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SP9P0CG40 484 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 HTR5AP47898 357 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TAS2R19P59542 299 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 OR2B8PP59922 312 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CDNFQ49AH0 187 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 C1orf189Q5VU69 101 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZNF574Q6ZN55 896 aaPredicted RBP14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PRR22Q8IZ63 422 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 GPX8Q8TED1 209 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TSLPQ969D9 159 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 OR8D2Q9GZM6 311 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZMAT3Q9HA38 289 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 MMP26Q9NRE1 261 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 C17orf51A8MQB3 221 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SFTA3P0C7M3 94 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PGAM2P15259 253 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 GLB1P16278 677 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 LAP3P28838 519 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PRKXP51817 358 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 LINC01590Q5TEZ4 76 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 RHOUQ7L0Q8 258 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZNF676Q8N7Q3 588 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 OR10H5Q8NGA6 315 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 KLHDC3Q9BQ90 382 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SLC25A21Q9BQT8 299 aaPredicted RBP14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZNF426Q9BUY5 554 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SELENOIQ9C0D9 397 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 NRSN2Q9GZP1 204 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 IKZF2Q9UKS7 526 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 AHCTF1Q8WYP5 2266 aa14.28□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PRRC2CQ9Y520 2896 aaKnown RBP14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CACNA1CQ13936 2221 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TMEM150CB9EJG8 249 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TACSTD2P09758 323 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 AQP2P41181 271 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ACTBP60709 375 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ACTG1P63261 375 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SRSF4Q08170 494 aaKnown RBP14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 PJVKQ0ZLH3 352 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 NKAPLQ5M9Q1 402 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SHISA6Q6ZSJ9 500 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ZNF627Q7L945 461 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 RNF141Q8WVD5 230 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 HOXB13Q92826 284 aaPredicted RBP14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 C3orf49Q96BT1 292 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 SEH1LQ96EE3 360 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 TRIM2Q9C040 744 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 RHOFQ9HBH0 211 aa14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.12
MAP1LC3B-201ENST00000268607 CCDC163A0A0D9SF12 145 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LY6G6EA0A0G2JKS1 128 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 hCG_1809904A0A1W2PP81 198 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 A0A1W2PQM1 296 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 A0A1W2PR64 198 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 A0A1W2PRV1 198 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 NUDT21O43809 227 aaKnown RBP14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 GLCEO94923 617 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MELTFP08582 738 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF28P17035 718 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 HOXA6P31267 233 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RPS27P42677 84 aaKnown RBP14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 HGFACQ04756 655 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 NKPD1Q17RQ9 610 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PYY3Q5JQD4 70 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LPCAT3Q6P1A2 487 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LEG1Q6P5S2 330 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MED25Q71SY5 747 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 FAM3DQ96BQ1 224 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 PIK3IP1Q96FE7 263 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 LRFN5Q96NI6 719 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 MESP1Q9BRJ9 268 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TOLLIPQ9H0E2 274 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 RPS10P5Q9NQ39 176 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 TMEM100Q9NV29 134 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 U3KQA8 63 aa14.27□□□□□ -0.13
MAP1LC3B-201ENST00000268607 ZNF292O60281 2723 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
MAP1LC3B-201ENST00000268607 EEF1E1-BLOC1S5C9J1V9 151 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms