RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 BTNL2Q9UIR0 455 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 METRNQ9UJH8 293 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 SSUH2Q9Y2M2 353 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 ENPP4Q9Y6X5 453 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 CIDEAO60543 219 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 CLDN14O95500 239 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 HLA-HP01893 362 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 HOXB5P09067 269 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 TBPP20226 339 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 GRPRP30550 384 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 KIR2DL1P43626 348 aaPredicted RBP7.09□□□□□ -1.27
USP3-201ENST00000268049 CX3CR1P49238 355 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 LY6DQ14210 128 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 RTL8BQ17RB0 113 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 IQCJQ1A5X6 159 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 ABLIM2Q6H8Q1 611 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 B3GLCTQ6Y288 498 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 ISCA2Q86U28 154 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 VRK2Q86Y07 508 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 SIAH3Q8IW03 269 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 CDH26Q8IXH8 852 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 OR51T1Q8NGJ9 327 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 ZNF775Q96BV0 537 aaPredicted RBP7.09□□□□□ -1.27
USP3-201ENST00000268049 S1PR3Q99500 378 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 PECRQ9BY49 303 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 DCAF13Q9NV06 445 aaKnown RBP7.09□□□□□ -1.27
USP3-201ENST00000268049 SERGEFQ9UGK8 458 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 B3GALT5Q9Y2C3 310 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 DNAJC15Q9Y5T4 150 aa7.09□□□□□ -1.27
USP3-201ENST00000268049 AHRRA9YTQ3 701 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 C9orf172C9J069 976 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 XRCC2O43543 280 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 NCR1O76036 304 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CEACAM5P06731 702 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ACSM4P0C7M7 580 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 LIFP15018 202 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ASCL1P50553 236 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 RAB7AP51149 207 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FABP9Q0Z7S8 132 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SMIM21Q3B7S5 101 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CTSL3PQ5NE16 218 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TCTN3Q6NUS6 607 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ADGRF3Q8IZF5 1079 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TCTE3Q8IZS6 198 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FADS6Q8N9I5 356 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 BABAM2Q9NXR7 383 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FRG2CA6NGY1 282 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GABRPO00591 440 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GLRA1P23415 457 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP3-201ENST00000268049 SRD5A2P31213 254 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 COL9A2Q14055 689 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 NUDT8Q8WV74 236 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ZNF681Q96N22 645 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 PARD6AQ9NPB6 346 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SDR39U1Q9NRG7 319 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 CHRNA9Q9UGM1 479 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 V9GY05 133 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 IGHV5-10-1A0A0J9YXX1 117 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 A0A1W2PPV4 95 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ZNF195O14628 629 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 EFSO43281 561 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FABP4P15090 132 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SPINK2P20155 84 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 POU3F3P20264 500 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 CD80P33681 288 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 RFC3P40938 356 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CCR6P51684 374 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 LIM2P55344 173 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CLDN6P56747 220 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 DUSP2Q05923 314 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CLDN23Q96B33 292 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ZNF286AQ9HBT8 521 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SLC52A3Q9NQ40 469 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 MIOXQ9UGB7 285 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 PCOLCE2Q9UKZ9 415 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ZNF443Q9Y2A4 671 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 SERPINE2P07093 398 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ACP1P24666 158 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GABRA5P31644 462 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GPR4P46093 362 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 RPS4XP62701 263 aaKnown RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 HSF1Q00613 529 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 CAMK2BQ13554 666 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FAHD2BQ6P2I3 314 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 DHRS4L2Q6PKH6 230 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ADGRG3Q86Y34 549 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SFTPA1Q8IWL2 248 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 C1orf174Q8IYL3 243 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 RDH10Q8IZV5 341 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GCNT2Q8N0V5 402 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TMEM239Q8WW34 195 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FAHD2AQ96GK7 314 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TMEM19Q96HH6 336 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TMEM231Q9H6L2 316 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 HRASLSQ9HDD0 168 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 TRBV23-1A0A0A0MS06 115 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 LNP1A1A4G5 178 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SCG5P05408 212 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms