RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GDNFP39905 211 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 RSPO4Q2I0M5 234 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 CISD2Q8N5K1 135 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 OR10K1Q8NGX5 313 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 KCNS2Q9ULS6 477 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 DCTN6O00399 190 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 HSPB6O14558 160 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 LYZL6O75951 148 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 CRYAAP02489 173 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 RBP2P50120 134 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 FXYD4P59646 89 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 GSG1Q2KHT4 349 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 GRPP07492 148 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 EDN3P14138 238 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 SEC61A1P61619 476 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 PABPC1L2AQ5JQF8 200 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 Q6ZTK2 550 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 PTTG3PQ9NZH4 202 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 LOC102723996A0A087X1L8 192 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 DNTTIP1Q9H147 329 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 PCNX2A6NKB5 2137 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 XRCC2O43543 280 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 NRASP01111 189 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 IKZF1Q13422 519 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 RAB35Q15286 201 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 SPATA46Q5T0L3 261 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 WFDC8Q8IUA0 241 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 FDCSPQ8NFU4 85 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 CREB3L1Q96BA8 519 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 DNPH1O43598 174 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 RLN2P04090 185 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 EPXP11678 715 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 CPT2P23786 658 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 FABP6P51161 128 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
PDLIM2-201ENST00000265810 NAP1L6A6NFF2 107 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 TMEM229AB2RXF0 380 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 M0R1B8 84 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 LALBAP00709 142 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 KNG1P01042 644 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 CALCBP10092 127 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 ZP4Q12836 540 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 PSMF1Q92530 271 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 SIGLEC12Q96PQ1 595 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 DVL2O14641 736 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 EIF2S3P41091 472 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 IRF3Q14653 427 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 CLCC1Q96S66 551 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 RTN4RQ9BZR6 473 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 FXYD6-FXYD2A0A087WZ82 144 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 ANXA3P12429 323 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 CCL2P13500 99 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 PCK2Q16822 640 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 C2orf76Q3KRA6 126 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 OR2AE1Q8NHA4 323 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 PPP1R35Q8TAP8 253 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 TBCCD1Q9NVR7 557 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 WASF3Q9UPY6 502 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 TAS2R19P59542 299 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 TRIM63Q969Q1 353 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 U3KQA8 63 aa12.84□□□□□ -0.35
PDLIM2-201ENST00000265810 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 MS4A18H0YCH9 400 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 HRGP04196 525 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 UQCRC1P31930 480 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 GABRA2P47869 451 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 MS4A18Q3C1V0 323 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 DRAM2Q6UX65 266 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 BMPERQ8N8U9 685 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms