RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SEC61A1P61619 476 aaKnown RBP8.17□□□□□ -1.1
VPS41-201ENST00000265745 TSPAN31Q12999 210 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 ECH1Q13011 328 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 SLC36A3Q495N2 470 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 SLC35F1Q5T1Q4 408 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 PGBD2Q6P3X8 592 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 C12orf54Q6X4T0 127 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 ZNF620Q6ZNG0 422 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 CFAP77Q6ZQR2 320 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 NAA40Q86UY6 237 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 DEFB107AQ8IZN7 70 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 OR10AD1Q8NGE0 317 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 OR52E2Q8NGJ4 325 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 GNPDA2Q8TDQ7 276 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
VPS41-201ENST00000265745 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 JMJD8Q96S16 334 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 PITX2Q99697 317 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 SLC30A2Q9BRI3 323 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 CDADC1Q9BWV3 514 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 SUCNR1Q9BXA5 334 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 TMEM165Q9HC07 324 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 PNRC2Q9NPJ4 139 aaKnown RBP8.17□□□□□ -1.1
VPS41-201ENST00000265745 ADAM30Q9UKF2 790 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 ARL2BPQ9Y2Y0 163 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 F5H5K5 113 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 TRIM77I1YAP6 450 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 MLNRO43193 412 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 FSTL3O95633 263 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 WNT2P09544 360 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 SELEP16581 610 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF12P17014 697 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 CPT2P23786 658 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 FPR2P25090 351 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 CFPP27918 469 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 SRP9P49458 86 aaKnown RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF154Q13106 437 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF181Q2M3W8 571 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 CLEC12AQ5QGZ9 265 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF362Q5T0B9 420 aaPredicted RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF770Q6IQ21 691 aaPredicted RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 C16orf89Q6UX73 402 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 LINC00346Q8IVM7 164 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZDHHC21Q8IVQ6 265 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 BPIFB2Q8N4F0 458 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 BHLHE23Q8NDY6 225 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 SDR9C7Q8NEX9 313 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 OR2AJ1Q8NGZ0 328 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ZNF420Q8TAQ5 688 aaPredicted RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 MAP6Q96JE9 813 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 SLC6A7Q99884 636 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ATF6BQ99941 703 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 RBM4Q9BWF3 364 aaKnown RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 HCAR1Q9BXC0 346 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 TRIM15Q9C019 465 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 WNT10AQ9GZT5 417 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 WDR76Q9H967 626 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 TMEM100Q9NV29 134 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 MRPL22Q9NWU5 206 aaKnown RBP8.16□□□□□ -1.1
VPS41-201ENST00000265745 NDE1Q9NXR1 346 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 IL20Q9NYY1 176 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 INSIG2Q9Y5U4 225 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 LYVE1Q9Y5Y7 322 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 AUP1Q9Y679 476 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 ANK2Q01484 3957 aa8.16□□□□□ -1.1
VPS41-201ENST00000265745 IGHV3-64DA0A0J9YX35 117 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CEACAM18A8MTB9 384 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 A8MXK9 166 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 F5H5P2 479 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 TNFRSF11BO00300 401 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 BHLHE40O14503 412 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 ZNF205O95201 554 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CYB5R3P00387 301 aaPredicted RBP8.15□□□□□ -1.1
VPS41-201ENST00000265745 GASTP01350 101 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 HLA-DQA2P01906 255 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 LCATP04180 440 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 HLA-DPB1P04440 258 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CD80P33681 288 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 PMELP40967 661 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 GATA4P43694 442 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 GNGT1P63211 74 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 ACTG1P63261 375 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 PAX8Q06710 450 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS41-201ENST00000265745 TRAP1Q12931 704 aaKnown RBP8.15□□□□□ -1.1
VPS41-201ENST00000265745 ESCO2Q56NI9 601 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 RPL13AP3Q6NVV1 102 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CYP2R1Q6VVX0 501 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 MOGAT3Q86VF5 341 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 MUC20Q8N307 709 aaPredicted RBP8.15□□□□□ -1.1
VPS41-201ENST00000265745 ZDHHC22Q8N966 263 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 OR9Q2Q8NGE9 314 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 OR4C15Q8NGM1 316 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 OR10S1Q8NGN2 331 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 ZNRF4Q8WWF5 429 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 C22orf15Q8WYQ4 148 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms