RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CELA2AP08217 269 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 NR2C1P13056 603 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 GABREP78334 506 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 NHLRC3Q5JS37 347 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 LY6G6FQ5SQ64 297 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 MUC20Q8N307 709 aaPredicted RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 GALNT16Q8N428 558 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 FAM89BQ8N5H3 189 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 OR2T35Q8NGX2 323 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 OR14K1Q8NGZ2 314 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 FGGYQ96C11 551 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 INTS12Q96CB8 462 aaKnown RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 C10orf35Q96D05 121 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 A0A0A6YYD4 124 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 EIF1BO60739 113 aaKnown RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 PRF1P14222 555 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 C6orf183Q5T699 404 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 B3GNTL1Q67FW5 361 aaPredicted RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 FAHD2BQ6P2I3 314 aaPredicted RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 OR2AK2Q8NG84 335 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 OR5D14Q8NGL3 314 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 FAHD2AQ96GK7 314 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 SF3B5Q9BWJ5 86 aaKnown RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 SSX5O60225 188 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 ERCC1P07992 297 aaPredicted RBP9.85□□□□□ -0.83
MSH3-201ENST00000265081 CCL3P10147 92 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 GTF2F2P13984 249 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 SPOCK1Q08629 439 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 MEF2DQ14814 521 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 PHYHD1Q5SRE7 291 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 C20orf196Q8IYI0 205 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 LYZL4Q96KX0 146 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 OR5B2Q96R09 309 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 GLTPQ9NZD2 209 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 MCRIP1C9JLW8 97 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 E9PLN8 166 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 ESCO2Q56NI9 601 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 NSUN5P2Q63ZY6 315 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 SLC16A14Q7RTX9 510 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 ZDHHC22Q8N966 263 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 OR10H5Q8NGA6 315 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 ADGRG7Q96K78 797 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 NELFAQ9H3P2 528 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 ZNF69Q9UC07 566 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 SYT7O43581 403 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 RAB3AP20336 220 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 ENPP1P22413 925 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 CASRP41180 1078 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 OR3A3P47888 321 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 SSR4P51571 173 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 KLHL24Q6TFL4 600 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 DOK3Q7L591 496 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 OR52B4Q8NGK2 314 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 UPB1Q9UBR1 384 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 SHOXO15266 292 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 QDPRP09417 244 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 NAT2P11245 290 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 EXOSC2Q13868 293 aaKnown RBP9.84□□□□□ -0.83
MSH3-201ENST00000265081 ATPAF1Q5TC12 328 aaPredicted RBP9.84□□□□□ -0.83
MSH3-201ENST00000265081 THOC7Q6I9Y2 204 aaKnown RBP9.84□□□□□ -0.83
MSH3-201ENST00000265081 BEST3Q8N1M1 668 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 OR4K17Q8NGC6 315 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 WDR89Q96FK6 387 aaPredicted RBP9.84□□□□□ -0.83
MSH3-201ENST00000265081 LPAR5Q9H1C0 372 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 GPN3Q9UHW5 284 aaPredicted RBP9.84□□□□□ -0.83
MSH3-201ENST00000265081 KIF25Q9UIL4 384 aa9.84□□□□□ -0.83
MSH3-201ENST00000265081 DHRS7CA6NNS2 312 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 TERTO14746 1132 aaKnown RBP9.83□□□□□ -0.84
MSH3-201ENST00000265081 PDGFBP01127 241 aaPredicted RBP9.83□□□□□ -0.84
MSH3-201ENST00000265081 ATXN8OSP0DMR3 200 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 RAC1P63000 192 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 Q0VFX4 171 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.83□□□□□ -0.84
MSH3-201ENST00000265081 SLC25A42Q86VD7 318 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.83□□□□□ -0.84
MSH3-201ENST00000265081 OR5M1Q8NGP8 315 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 NKIRAS2Q9NYR9 191 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 FBXO4Q9UKT5 387 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 IGKV1-9A0A0C4DH69 117 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 B3GALNT1O75752 331 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 CCL4P13236 92 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 ZNF43P17038 809 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 RGS19P49795 217 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 ABLIM2Q6H8Q1 611 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 PPP1R32Q7Z5V6 425 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 GGNQ86UU5 652 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 POFUT1Q9H488 388 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 A0A1W2PPL8 197 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 H3BSH0 61 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 CA11O75493 328 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 OR4E1P0C645 316 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 RPA2P15927 270 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 ZNF24P17028 368 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 CRYGSP22914 178 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 CDAP32320 146 aa9.83□□□□□ -0.84
MSH3-201ENST00000265081 GK2Q14410 553 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms