RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OTX1P32242 354 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CRYBB2P43320 205 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TPTEP56180 551 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TAS2R43P59537 309 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 PSMA6P60900 246 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 FABP5Q01469 135 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ECH1Q13011 328 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 GFOD2Q3B7J2 385 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF829Q3KNS6 432 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SNAI3Q3KNW1 292 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC25A35Q3KQZ1 300 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CCDC58Q4VC31 144 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 BCL2L15Q5TBC7 163 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 RHOUQ7L0Q8 258 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 PRSS45Q7RTY3 260 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CCDC36Q8IYA8 594 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 C17orf78Q8N4C9 275 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC30A7Q8NEW0 376 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 STEAP2Q8NFT2 490 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 OR8B12Q8NGG6 310 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 OR51A4Q8NGJ6 313 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 OR5AK2Q8NH90 309 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ITLN2Q8WWU7 325 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ASB5Q8WWX0 329 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SPTSSAQ969W0 71 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ORAI1Q96D31 301 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SMIM19Q96E16 107 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 POM121L2Q96KW2 1035 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 MYCBPQ99417 103 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CHCHD6Q9BRQ6 235 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 WACQ9BTA9 647 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 HDHD5Q9BXW7 423 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 RBM38Q9H0Z9 239 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 IGHV1-18A0A0C4DH31 117 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 M0R1B8 84 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 LMX1BO60663 402 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 NGFP01138 241 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TTRP02766 147 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 LCATP04180 440 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 DCTDP32321 178 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 APLNRP35414 380 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 WNT5AP41221 380 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 MMP16P51512 607 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 PPA1Q15181 289 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TIMM23BQ5SRD1 257 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 FAM27D1Q5T7N8 215 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TMEM91Q6ZNR0 172 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 DPPA2Q7Z7J5 298 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 P2RY8Q86VZ1 359 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ELMOD2Q8IZ81 293 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 OR2AE1Q8NHA4 323 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 LINC01560Q8TB33 94 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 ABHD4Q8TB40 342 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 OR51E1Q8TCB6 317 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 RPS4Y2Q8TD47 263 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 PGAM5Q96HS1 289 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 WFIKKN1Q96NZ8 548 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 POFUT1Q9H488 388 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 NIPAL2Q9H841 368 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 EXOSC4Q9NPD3 245 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 KCNJ16Q9NPI9 418 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 AMDHD2Q9Y303 409 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 USP9XQ93008 2570 aaPredicted RBP8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 ANKRD61A6NGH8 418 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 A6NIN4 97 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 IGKV3-15P01624 115 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 CECR9P0C854 216 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 RNF224P0DH78 156 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 SOX2P48431 317 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 CCR9P51686 369 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 VBP1P61758 197 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 NCS1P62166 190 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 GPR50Q13585 617 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 MTFR2Q6P444 385 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 DRAM2Q6UX65 266 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 SEZ6L2Q6UXD5 910 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 ANKRD13BQ86YJ7 626 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 WFDC8Q8IUA0 241 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 EGFL6Q8IUX8 553 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF101Q8IZC7 436 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 RNASE6Q93091 150 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 SGK3Q96BR1 496 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 MUCL1Q96DR8 90 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 LYZL4Q96KX0 146 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 PPIL3Q9H2H8 161 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 NUFIP1Q9UHK0 495 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 ENPP5Q9UJA9 477 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 STARD10Q9Y365 291 aa8.43□□□□□ -1.06
SNRNP40-201ENST00000263694 A0A1B0GTI1 187 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ACOD1A6NK06 481 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 TMEM212A6NML5 194 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 GABRPO00591 440 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms