RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RNF222A6NCQ9 220 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 MEIS3P1A6NDR6 274 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 GGT3PA6NGU5 568 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 SOX1O00570 391 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-201ENST00000261963 SSX5O60225 188 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 CTAG2O75638 210 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 F12P00748 615 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-201ENST00000261963 FREM3P0C091 2139 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 SNRPEP62304 92 aaKnown RBP20.16■□□□□ 0.82
MCF2L-201ENST00000261963 EIF2B1Q14232 305 aaKnown RBP20.16■□□□□ 0.82
MCF2L-201ENST00000261963 LRRC37A5PQ49AS3 106 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 LIN54Q6MZP7 749 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 ZNF813Q6ZN06 617 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 ZNF574Q6ZN55 896 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-201ENST00000261963 SPEM1Q8N4L4 309 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 ELP5Q8TE02 316 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 ARL5BQ96KC2 179 aa20.16■□□□□ 0.82
MCF2L-201ENST00000261963 TMEM82A0PJX8 343 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 F5H0A9 414 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-201ENST00000261963 MS4A18H0YCH9 400 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 POU3F4P49335 361 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 MS4A18Q3C1V0 323 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 STEAP1BQ6NZ63 245 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 ANKRD37Q7Z713 158 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 CATSPERDQ86XM0 798 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 THRSPQ92748 146 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 DVL3Q92997 716 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-201ENST00000261963 NKX3-1Q99801 234 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-201ENST00000261963 ATXN7L1Q9ULK2 861 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-201ENST00000261963 LRP12Q9Y561 859 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 IGLV3-12A0A075B6K2 115 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 A0A1B0GTI1 187 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 TMEM200CA6NKL6 621 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 OR2AT4A6NND4 320 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 FGF16O43320 207 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 ACTL6AO96019 429 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 RAB5BP61020 215 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 SRSF4Q08170 494 aaKnown RBP20.15■□□□□ 0.82
MCF2L-201ENST00000261963 FAM166AQ6J272 317 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 LPCAT3Q6P1A2 487 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 C5orf46Q6UWT4 87 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 NDUFAF7Q7L592 441 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 TMED4Q7Z7H5 227 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 MISPQ8IVT2 679 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 ARL11Q969Q4 196 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 SUSD2Q9UGT4 822 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 SRPK3Q9UPE1 567 aa20.15■□□□□ 0.82
MCF2L-201ENST00000261963 ANKUB1A6NFN9 424 aa20.14■□□□□ 0.82
MCF2L-201ENST00000261963 TIAF1O95411 115 aa20.14■□□□□ 0.82
MCF2L-201ENST00000261963 MELTFP08582 738 aa20.14■□□□□ 0.82
MCF2L-201ENST00000261963 ATXN7L3Q14CW9 347 aaPredicted RBP20.14■□□□□ 0.82
MCF2L-201ENST00000261963 KCTD18Q6PI47 426 aaPredicted RBP20.14■□□□□ 0.82
MCF2L-201ENST00000261963 GTPBP8Q8N3Z3 284 aaPredicted RBP20.14■□□□□ 0.82
MCF2L-201ENST00000261963 TMEM234Q8WY98 164 aa20.14■□□□□ 0.82
MCF2L-201ENST00000261963 EIF1BO60739 113 aaKnown RBP20.14■□□□□ 0.81
MCF2L-201ENST00000261963 EIF1P41567 113 aaKnown RBP20.14■□□□□ 0.81
MCF2L-201ENST00000261963 RIDAP52758 137 aaKnown RBP20.14■□□□□ 0.81
MCF2L-201ENST00000261963 GLO1Q04760 184 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 OR52N5Q8NH56 324 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 ASB5Q8WWX0 329 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 SEC11CQ9BY50 192 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 TREM1Q9NP99 234 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 NIT2Q9NQR4 276 aa20.14■□□□□ 0.81
MCF2L-201ENST00000261963 ASCC3Q8N3C0 2202 aaKnown RBP20.13■□□□□ 0.81
MCF2L-201ENST00000261963 SLC17A2O00624 439 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 SRSF10O75494 262 aaKnown RBP20.13■□□□□ 0.81
MCF2L-201ENST00000261963 FOSL1P15407 271 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 CRABP1P29762 137 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 PRSS3P35030 304 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 CASRP41180 1078 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 SRSF3P84103 164 aaKnown RBP20.13■□□□□ 0.81
MCF2L-201ENST00000261963 FMODQ06828 376 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 RAB11BQ15907 218 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 C2orf76Q3KRA6 126 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 PAQR8Q8TEZ7 354 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 ASB10Q8WXI3 467 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 ST8SIA1Q92185 356 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 FAM3DQ96BQ1 224 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 TRAV18A0A075B6X5 111 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 TTLL8A6PVC2 850 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 NUDT19A8MXV4 375 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 ABOP16442 354 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 TMEM225Q6GV28 225 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 PLPP7Q8NBV4 271 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 SLC26A10Q8NG04 563 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 CDV3Q9UKY7 258 aaKnown RBP20.13■□□□□ 0.81
MCF2L-201ENST00000261963 LHX6Q9UPM6 363 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 DHDHQ9UQ10 334 aa20.13■□□□□ 0.81
MCF2L-201ENST00000261963 SMAD9O15198 467 aaKnown RBP20.12■□□□□ 0.81
MCF2L-201ENST00000261963 CD34P28906 385 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 ZP4Q12836 540 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 ECH1Q13011 328 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 OR7A5Q15622 319 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 CLEC1AQ8NC01 280 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 IGKV1D-43A0A0B4J1Z2 117 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 C17orf67Q0P5P2 114 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 INPP5JQ15735 1006 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-201ENST00000261963 NKAIN1Q4KMZ8 207 aa20.12■□□□□ 0.81
MCF2L-201ENST00000261963 UNQ6126/PRO20091Q6UXV3 157 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms