RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CLDN12P56749 244 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 PPP1CBP62140 327 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 XKR7Q5GH72 579 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 TRAT1Q6PIZ9 186 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 ASCL5Q7RTU5 278 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 GALMQ96C23 342 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OR2W5A6NFC9 320 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 CYP4V2Q6ZWL3 525 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OR6K3Q8NGY3 331 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 FRZBQ92765 325 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 PINX1Q96BK5 328 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 SCN4AP35499 1836 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 ABCA3Q99758 1704 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 A0A1B0GUH1 482 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF117Q03924 483 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OR51H1Q8NH63 302 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OLIG1Q8TAK6 271 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 TRAV38-1A0A0B4J264 116 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 TLE4Q04727 773 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 Q56UQ5 140 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 ANKRD53Q8N9V6 530 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 SUMF2Q8NBJ7 301 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 GRAMD2BQ96HH9 432 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 BCL2L10Q9HD36 194 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 LAMB2P55268 1798 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 CALCBP10092 127 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 GNB3P16520 340 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 PAX6P26367 422 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF121P58317 390 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 TMEM81Q6P7N7 255 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 OR10K1Q8NGX5 313 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 GPR119Q8TDV5 335 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 TRABD2BA6NFA1 517 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 PRF1P14222 555 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 ATF1P18846 271 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 CXorf67Q86X51 503 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 NUBPLQ8TB37 319 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 HYAL3O43820 417 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 THBS4P35443 961 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 B4GALNT1Q00973 533 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 SFXN4Q6P4A7 337 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 ARAP2Q8WZ64 1704 aa12.23□□□□□ -0.45
PDGFRB-201ENST00000261799 FUT7Q11130 342 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 DNASE2O00115 360 aaPredicted RBP12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 ARPC5O15511 151 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 KLK8O60259 260 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC2A10O95528 541 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 CDAP32320 146 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC35A2P78381 396 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 TIGD3Q6B0B8 471 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 C17orf107Q6ZR85 190 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 COX14Q96I36 57 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OSGIN1Q9UJX0 560 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PILRBQ9UKJ0 227 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 RCE1Q9Y256 329 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OMGP23515 440 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 COX7A1P24310 79 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PEA15Q15121 130 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC38A9Q8NBW4 561 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PLPP5Q8NEB5 264 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OR2A5Q96R48 311 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 TEAD3Q99594 435 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 CMC2Q9NRP2 79 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 UBE2IP63279 158 aaKnown RBP12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 DOC2BQ14184 412 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 PLA1AQ53H76 456 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 NHLRC1Q6VVB1 395 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF793Q6ZN11 406 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 RBM45Q8IUH3 476 aaKnown RBP12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 HYLS1Q96M11 299 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC38A1Q9H2H9 487 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 A4GNTQ9UNA3 340 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 A0A0B4J203 849 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SP1P08047 785 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 CT45A10P0DMU9 189 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 GNG3P63215 75 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 KDM4DQ6B0I6 523 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OR2M7Q8NG81 312 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SUN5Q8TC36 379 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
PDGFRB-201ENST00000261799 SULT1B1O43704 296 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 ANGPTL7O43827 346 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 SCG5P05408 212 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 LRRC29Q8WV35 223 aa12.21□□□□□ -0.45
PDGFRB-201ENST00000261799 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms