RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 THAP3Q8WTV1 239 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 PTX4Q96A99 478 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 NICN1Q9BSH3 213 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 SLC5A6Q9Y289 635 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 FTCDNL1E5RQL4 147 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 IL2RAP01589 272 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 IFNA6P05013 189 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 PHF19Q5T6S3 580 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 RAB12Q6IQ22 244 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 ASB10Q8WXI3 467 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 DAZLQ92904 295 aaKnown RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 ADAT1Q9BUB4 502 aaKnown RBP17.24■□□□□ 0.35
SCARB1-201ENST00000261693 TPSD1Q9BZJ3 242 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 VDAC3Q9Y277 283 aa17.24■□□□□ 0.35
SCARB1-201ENST00000261693 ARPC4-TTLL3A0A0A6YYG9 625 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PCP4L1A6NKN8 68 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 SHISA8B8ZZ34 492 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 EFSO43281 561 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF208O43345 1280 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 SYT7O43581 403 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 OR2T1O43869 369 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 TTRP02766 147 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PNLIPRP2P54317 469 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 COX15Q7KZN9 410 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 FOXRED1Q96CU9 486 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PHYHIPLQ96FC7 376 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 ZC3H10Q96K80 434 aaKnown RBP17.23■□□□□ 0.35
SCARB1-201ENST00000261693 MESP1Q9BRJ9 268 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 NUDT22Q9BRQ3 303 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PRR13Q9NZ81 148 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 CSAG2Q9Y5P2 127 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 CABIN1Q9Y6J0 2220 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PRKACAP17612 351 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 SERPINF1P36955 418 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 FAM219AQ8IW50 185 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 ZDHHC22Q8N966 263 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 OR1M1Q8NGA1 313 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 PAQR8Q8TEZ7 354 aa17.23■□□□□ 0.35
SCARB1-201ENST00000261693 MPTX1A8MV57 137 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF217O75362 1048 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 AWAT2Q6E213 333 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 OR1N1Q8NGS0 311 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ROBO4Q8WZ75 1007 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 DCUN1D4Q92564 292 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 TSNAXQ99598 290 aaKnown RBP17.22■□□□□ 0.35
SCARB1-201ENST00000261693 SLC6A15Q9H2J7 730 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 PIGMQ9H3S5 423 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 SAV1Q9H4B6 383 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-201ENST00000261693 CHMP1AQ9HD42 196 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-201ENST00000261693 FAM206AQ9NX38 181 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 LILRA5A6NI73 299 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 TO15178 435 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 SSX5O60225 188 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ATG12O94817 140 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 HLA-GP17693 338 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 QRFPP83859 136 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 TDGQ13569 410 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ANGPTL5Q86XS5 388 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ZNF101Q8IZC7 436 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 ARMC10Q8N2F6 343 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 OR5AP2Q8NGF4 316 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 OR1L3Q8NH93 324 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 SLAMF6Q96DU3 332 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 KCNK17Q96T54 332 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-201ENST00000261693 HPF1Q9NWY4 346 aa17.22■□□□□ 0.35
SCARB1-201ENST00000261693 SPAG17Q6Q759 2223 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 H3BMH7 237 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 H3BML4 177 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 RAB3AP20336 220 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 FBLP22087 321 aaKnown RBP17.21■□□□□ 0.35
SCARB1-201ENST00000261693 PSMB6P28072 239 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 ARL4DP49703 201 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 GUCA2BQ16661 112 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 DMRTC1Q5HYR2 192 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 DNM1P34Q6PK57 102 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 SLC22A24Q8N4F4 322 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 RNF133Q8WVZ7 376 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 C5orf34Q96MH7 638 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 VN1R1Q9GZP7 353 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 PBOV1Q9GZY1 135 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 WDFY3Q8IZQ1 3526 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 A0A0B4J2A0 478 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 MMP16P51512 607 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 SRSF3P84103 164 aaKnown RBP17.21■□□□□ 0.35
SCARB1-201ENST00000261693 TLE3Q04726 772 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 PABPC1L2AQ5JQF8 200 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 GKN2Q86XP6 184 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 CCDC36Q8IYA8 594 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 GTPBP8Q8N3Z3 284 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-201ENST00000261693 OR4K17Q8NGC6 315 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 C11orf40Q8WZ69 217 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 SOX7Q9BT81 388 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 SHPKQ9UHJ6 478 aa17.21■□□□□ 0.35
SCARB1-201ENST00000261693 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.34
SCARB1-201ENST00000261693 A6NIZ1 184 aa17.2■□□□□ 0.34
SCARB1-201ENST00000261693 OPN1LWP04000 364 aa17.2■□□□□ 0.34
SCARB1-201ENST00000261693 CRHP06850 196 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms