RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SAMD4AQ9UPU9 718 aaKnown RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 NAALAD2Q9Y3Q0 740 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 DNAJC13O75165 2243 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 A0A0J9YYE9 177 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ERICH4A6NGS2 130 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SAGE2PA6NJ88 616 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 B4DXG7 233 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 G3V4G9 280 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 GOLGA8MH3BSY2 632 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 RTL8CO15255 209 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 RGS16O15492 202 aaPredicted RBP3.53□□□□□ -1.84
TRA2B-201ENST00000259043 TAPBPO15533 448 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 EFNA2O43921 213 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 KBTBD11O94819 623 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 VENTXO95231 258 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 TRBC1P01850 177 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF30P17039 623 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 NCF2P19878 526 aaPredicted RBP3.53□□□□□ -1.84
TRA2B-201ENST00000259043 IMPDH1P20839 514 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PHBP35232 272 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SPINT3P49223 89 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 EFNA3P52797 238 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ACTR3P61158 418 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 VLDLRP98155 873 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 KCNJ11Q14654 390 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 LAGE3Q14657 143 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SSX2Q16385 188 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 DPYSL2Q16555 572 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ZSCAN26Q16670 478 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PHYHD1Q5SRE7 291 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OLFML2AQ68BL7 652 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 C4orf22Q6V702 233 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 TRMT10CQ7L0Y3 403 aaKnown RBP3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PSTKQ8IV42 348 aaKnown RBP3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PDIK1LQ8N165 341 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 CSNK1A1LQ8N752 337 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 GPR26Q8NDV2 337 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 WFDC11Q8NEX6 87 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OR56B2PQ8NGI1 322 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OR5D13Q8NGL4 314 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OR9A4Q8NGU2 314 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OR2Y1Q8NGV0 311 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ITLN1Q8WWA0 313 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PSMF1Q92530 271 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PKNOX2Q96KN3 472 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 CSPG4P5Q96PW8 444 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 RNF157Q96PX1 679 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 LYSMD1Q96S90 227 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PEBP4Q96S96 227 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 TIMM29Q9BSF4 260 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SLC7A5P2Q9GIP4 190 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 NUDT15Q9NV35 164 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SLC2A6Q9UGQ3 507 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 RASD1Q9Y272 281 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 PIGLQ9Y2B2 252 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 MEMO1Q9Y316 297 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 SCN2AQ99250 2005 aa3.53□□□□□ -1.84
TRA2B-201ENST00000259043 ARID1AO14497 2285 aa3.53□□□□□ -1.85
TRA2B-201ENST00000259043 TRAV17A0A0B4J275 112 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 IGHV2-70DA0A0C4DH43 119 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 OR6C74A6NCV1 312 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 HACD1B0YJ81 288 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 E9PLD3 99 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 DFFAO00273 331 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 SLC17A2O00624 439 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 DNALI1O14645 258 aaPredicted RBP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 KMOO15229 486 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 EIF3HO15372 352 aaKnown RBP eCLIP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 FCMRO60667 390 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 CA1P00915 261 aaPredicted RBP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 UMPSP11172 480 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 MMP11P24347 488 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 SLCO1A2P46721 670 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 P2RY1P47900 373 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 CCT3P49368 545 aaKnown RBP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 KRTAP10-1P60331 282 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 ARG2P78540 354 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 GBE1Q04446 702 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 PDIA2Q13087 525 aaKnown RBP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 XRCC4Q13426 336 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 PRPSAP1Q14558 356 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 KCTD21Q4G0X4 260 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 ARMC12Q5T9G4 340 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 AGBL2Q5U5Z8 902 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 METTL11BQ5VVY1 283 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 ZNF57Q68EA5 555 aaPredicted RBP3.52□□□□□ -1.85
TRA2B-201ENST00000259043 ZNF600Q6ZNG1 722 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 COX15Q7KZN9 410 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 TRPM8Q7Z2W7 1104 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 TPRA1Q86W33 373 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 SERPINA9Q86WD7 417 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 OOSP2Q86WS3 158 aa3.52□□□□□ -1.85
TRA2B-201ENST00000259043 HIPK1Q86Z02 1210 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms