RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZNF808Q8N4W9 903 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 OR4C3Q8NH37 302 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 PIK3IP1Q96FE7 263 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 NOX3Q9HBY0 568 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 HINT3Q9NQE9 182 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 THYN1Q9P016 225 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 PRF1P14222 555 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 EDDM3AQ14507 147 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 TESK1Q15569 626 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 LIPNQ5VXI9 398 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 COX15Q7KZN9 410 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 DOLPP1Q86YN1 238 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 FBXW5Q969U6 566 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 C3orf49Q96BT1 292 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 ISOC1Q96CN7 298 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 DUS3LQ96G46 650 aaKnown RBP12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 CIB3Q96Q77 187 aaPredicted RBP12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 FKBP11Q9NYL4 201 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 ONECUT1Q9UBC0 465 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 NEU3Q9UQ49 428 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 TRDV1A0A1B0GX56 115 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 SOCS6O14544 535 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 MITFO75030 526 aaPredicted RBP12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2B2Q9GZK3 357 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 C12orf4Q9NQ89 552 aa12.02□□□□□ -0.48
PRPF38A-201ENST00000257181 F6UZH7 168 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SPRY3O43610 288 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SC5DO75845 299 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 KITLGP21583 273 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SELPLGQ14242 412 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 GLIPR1L1Q6UWM5 242 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 TIPARPQ7Z3E1 657 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 ZNF721Q8TF20 911 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SLC29A1Q99808 456 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 H3BSA7 217 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SCG5P05408 212 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 ZP4Q12836 540 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 FJX1Q86VR8 437 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 FAM71CQ8NEG0 241 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 LUZP4Q9P127 313 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SMCHD1A6NHR9 2005 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SULT1C2O00338 296 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 LILRB5O75023 590 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 ALPLP05186 524 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 GYPBP06028 91 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 TMEM267Q0VDI3 215 aaPredicted RBP12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 TSEN54Q7Z6J9 526 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 FAM57AQ8TBR7 257 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 SAP30LQ9HAJ7 183 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 GPATCH2Q9NW75 528 aa12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
PRPF38A-201ENST00000257181 LIPT2A6NK58 231 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 J3KTA2 159 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 IGF2P01344 180 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SKP2Q13309 424 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RHEBQ15382 184 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 MRGPRGQ86SM5 289 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RPEQ96AT9 228 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SULT4A1Q9BR01 284 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 EMC6Q9BV81 110 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 GALNT9Q9HCQ5 603 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 ACKR4Q9NPB9 350 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SLCO1B1Q9Y6L6 691 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 A0A1W2PPV9 198 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 A8MXE2 369 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 GABRPO00591 440 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SHOXO15266 292 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 APOL3O95236 402 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SCAND1P57086 179 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SFTPA1Q8IWL2 248 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 LSMEM1Q8N8F7 131 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RALGAPA2Q2PPJ7 1873 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 PLPP3O14495 311 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 CA11O75493 328 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RRASP10301 218 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 COX6A1P12074 109 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RFX2P48378 723 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 KDM4DQ6B0I6 523 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 BRICD5Q6PL45 260 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 SNRNP27Q8WVK2 155 aaKnown RBP12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 ST8SIA4Q92187 359 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 HTRA1Q92743 480 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 GGHQ92820 318 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 RP2O75695 350 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 ZNF554Q86TJ5 538 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 NKAIN4Q8IVV8 208 aa12.01□□□□□ -0.49
PRPF38A-201ENST00000257181 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms