RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 OR6C1Q96RD1 312 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 IGKV1D-43A0A0B4J1Z2 117 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 ZNF878C9JN71 531 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 CD96P40200 585 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 NR0B2Q15466 257 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 TFAP2EQ6VUC0 442 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 SLC26A10Q8NG04 563 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 DUSP15Q9H1R2 295 aaPredicted RBP16.47■□□□□ 0.23
LRP3-201ENST00000253193 SLC17A5Q9NRA2 495 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 DENND4AQ7Z401 1863 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 FADS1O60427 444 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 KNG1P01042 644 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 AMY2BP19961 511 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 MC2RQ01718 297 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 BAMBIQ13145 260 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 CCDC36Q8IYA8 594 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 RPS4Y2Q8TD47 263 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 CRB3Q9BUF7 120 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 ZNF701Q9NV72 531 aaPredicted RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 SULT1C2O00338 296 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 UBBP0CG47 229 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 IL32P24001 234 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 RPS27AP62979 156 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 UBA52P62987 128 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 DHODHQ02127 395 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 ROM1Q03395 351 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 AIMP2Q13155 320 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 TEX30Q5JUR7 227 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 MAFIPQ8WZ33 124 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 MRPS24Q96EL2 167 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 MBD2Q9UBB5 411 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 MRPS28Q9Y2Q9 187 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 SFTPBP07988 381 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 GABRA4P48169 554 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 AKR1D1P51857 326 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 TMEM17Q86X19 198 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 GTPBP8Q8N3Z3 284 aaPredicted RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 PAQR8Q8TEZ7 354 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 WNT2BQ93097 391 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 TSNAXQ99598 290 aaKnown RBP16.46■□□□□ 0.23
LRP3-201ENST00000253193 ZNF576Q9H609 170 aa16.46■□□□□ 0.23
LRP3-201ENST00000253193 A0A0B4J2A0 478 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 TUBAL3A6NHL2 446 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 RAB3CQ96E17 227 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 ADAT3Q96EY9 351 aaPredicted RBP16.45■□□□□ 0.22
LRP3-201ENST00000253193 PGAM5Q96HS1 289 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 SAV1Q9H4B6 383 aaPredicted RBP16.45■□□□□ 0.22
LRP3-201ENST00000253193 SHPKQ9UHJ6 478 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 FGF2P09038 288 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 INPP5JQ15735 1006 aaPredicted RBP16.45■□□□□ 0.22
LRP3-201ENST00000253193 NKAIN1Q4KMZ8 207 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 NKAPLQ5M9Q1 402 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 PHF19Q5T6S3 580 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 OVCH2Q7RTZ1 564 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 TREM1Q9NP99 234 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 PRR13Q9NZ81 148 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 PIAS2O75928 621 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 PNLDC1Q8NA58 520 aaKnown RBP16.45■□□□□ 0.22
LRP3-201ENST00000253193 VSIG4Q9Y279 399 aa16.45■□□□□ 0.22
LRP3-201ENST00000253193 A0A1W2PQD3 144 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 G3V3Y1 287 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 TLX3O43711 291 aaPredicted RBP16.44■□□□□ 0.22
LRP3-201ENST00000253193 IGHG1P01857 330 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 ITGB2P05107 769 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 MGMTP16455 207 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 APOBEC1P41238 236 aaKnown RBP16.44■□□□□ 0.22
LRP3-201ENST00000253193 TDGQ13569 410 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 C11orf87Q6NUJ2 197 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 OR51T1Q8NGJ9 327 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 ELP5Q8TE02 316 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 GPR84Q9NQS5 396 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 MS4A18H0YCH9 400 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 SDCBPO00560 298 aaPredicted RBP16.44■□□□□ 0.22
LRP3-201ENST00000253193 DMWDQ09019 674 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 MS4A18Q3C1V0 323 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 CCDC157Q569K6 752 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 ASB10Q8WXI3 467 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 CHMP1AQ9HD42 196 aaPredicted RBP16.44■□□□□ 0.22
LRP3-201ENST00000253193 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
LRP3-201ENST00000253193 RER1O15258 196 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 MYBPHQ13203 477 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 LYG2Q86SG7 212 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 NAXDQ8IW45 347 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 LRRC18Q8N456 261 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 OR5H2Q8NGV7 314 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 NICN1Q9BSH3 213 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 TMEM59Q9BXS4 323 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 WDR13Q9H1Z4 485 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 ACKR4Q9NPB9 350 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 KLHL13Q9P2N7 655 aa16.44■□□□□ 0.22
LRP3-201ENST00000253193 IGKV3D-11A0A0A0MRZ8 115 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 SCRG1O75711 98 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 OR2J2O76002 312 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 RPA2P15927 270 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 CSNK2A1P68400 391 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms