RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 HKR1P10072 659 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 EGR1P18146 543 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 CD80P33681 288 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 GNB2P62879 340 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 MALLQ13021 153 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 KRTAP27-1Q3LI81 207 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 SLC18B1Q6NT16 456 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 MOGAT3Q86VF5 341 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 KLBQ86Z14 1044 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 BHLHE23Q8NDY6 225 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 ATF6BQ99941 703 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 MS4A7Q9GZW8 240 aaPredicted RBP17.65■□□□□ 0.42
NEDD8-201ENST00000250495 WDR76Q9H967 626 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 A0A1B0GWJ7 208 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 HLA-DQA2P01906 255 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 SEMG1P04279 462 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 ACSM4P0C7M7 580 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 HSD17B1P14061 328 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 IRF2P14316 349 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 RASSF2P50749 326 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 BAMBIQ13145 260 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 LINC00346Q8IVM7 164 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 BCL6BQ8N143 479 aaPredicted RBP17.64■□□□□ 0.41
NEDD8-201ENST00000250495 CELF2-AS1Q8N7Q2 184 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 OR52E2Q8NGJ4 325 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 GNPDA2Q8TDQ7 276 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 RAB40AQ8WXH6 277 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 ERGIC1Q969X5 290 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 NEIL1Q96FI4 390 aaPredicted RBP17.64■□□□□ 0.41
NEDD8-201ENST00000250495 NSMCE2Q96MF7 247 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 TMEM246Q9BRR3 403 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 CYB5R1Q9UHQ9 305 aa17.64■□□□□ 0.41
NEDD8-201ENST00000250495 OR6C68A6NDL8 312 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 LCATP04180 440 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 FABP3P05413 133 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 GATA4P43694 442 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 MTNR1AP48039 350 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 GSSP48637 474 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 TPTEP56180 551 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 PAX2Q02962 417 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 GK2Q14410 553 aaPredicted RBP17.63■□□□□ 0.41
NEDD8-201ENST00000250495 CFAP77Q6ZQR2 320 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 ASRGL1Q7L266 308 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 NLRC3Q7RTR2 1065 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 OR8B3Q8NGG8 313 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 OR8B2Q96RD0 313 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 KCNG2Q9UJ96 466 aa17.63■□□□□ 0.41
NEDD8-201ENST00000250495 IGHV3-64DA0A0J9YX35 117 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 HLA-DPB1P04440 258 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF823P16415 610 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 RRM2P31350 389 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 GGT2P36268 569 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 TRAP1Q12931 704 aaKnown RBP17.62■□□□□ 0.41
NEDD8-201ENST00000250495 TSPAN31Q12999 210 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF404Q494X3 552 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 SAMD4BQ5PRF9 694 aaKnown RBP17.62■□□□□ 0.41
NEDD8-201ENST00000250495 PGAP1Q75T13 922 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 NAA40Q86UY6 237 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 SDR9C7Q8NEX9 313 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 OR11L1Q8NGX0 322 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 SLCO4A1Q96BD0 722 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF747Q9BV97 191 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 IL1RAPQ9NPH3 570 aa17.62■□□□□ 0.41
NEDD8-201ENST00000250495 IGHV2-70DA0A0C4DH43 119 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 KIR2DS1A0A191URI9 304 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 DNAJC9-AS1A6NH13 148 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 PMELP40967 661 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.61■□□□□ 0.41
NEDD8-201ENST00000250495 MAB21L1Q13394 359 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 RPL13AP3Q6NVV1 102 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 PGAM4Q8N0Y7 254 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 PARP8Q8N3A8 854 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 Q8TCH9 128 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 SPRYD4Q8WW59 207 aaPredicted RBP17.61■□□□□ 0.41
NEDD8-201ENST00000250495 SPTSSAQ969W0 71 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 SLC25A28Q96A46 364 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 UPRTQ96BW1 309 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF48Q96MX3 618 aaPredicted RBP17.61■□□□□ 0.41
NEDD8-201ENST00000250495 CDRT15Q96T59 188 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 SLC22A4Q9H015 551 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 PNRC2Q9NPJ4 139 aaKnown RBP17.61■□□□□ 0.41
NEDD8-201ENST00000250495 CD300AQ9UGN4 299 aa17.61■□□□□ 0.41
NEDD8-201ENST00000250495 NOP16Q9Y3C1 178 aaKnown RBP17.61■□□□□ 0.41
NEDD8-201ENST00000250495 KRT36O76013 467 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 MSX2P35548 267 aaPredicted RBP17.6■□□□□ 0.41
NEDD8-201ENST00000250495 CD200P41217 278 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 PITPNBP48739 271 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 RAD23AP54725 363 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 DBPQ10586 325 aaPredicted RBP17.6■□□□□ 0.41
NEDD8-201ENST00000250495 SLC35F1Q5T1Q4 408 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 SHISA2Q6UWI4 295 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF620Q6ZNG0 422 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 C9orf139Q6ZV77 190 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 MRPL21Q7Z2W9 205 aaKnown RBP17.6■□□□□ 0.41
NEDD8-201ENST00000250495 OR52L1Q8NGH7 329 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 DUX5Q96PT3 197 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 FN3KQ9H479 309 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 MRPL22Q9NWU5 206 aaKnown RBP17.6■□□□□ 0.41
NEDD8-201ENST00000250495 CLN8Q9UBY8 286 aa17.6■□□□□ 0.41
NEDD8-201ENST00000250495 PCDHGB1Q9Y5G3 927 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms