RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CFIP05156 583 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 CSN2P05814 226 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 ADH6P28332 368 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 EIF1P41567 113 aaKnown RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF121P58317 390 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF239Q16600 458 aaKnown RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 SCGB2B2Q4G0G5 96 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC22A6Q4U2R8 563 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 SFRP5Q5T4F7 317 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF584Q8IVC4 421 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 GVQW1Q8N7I0 195 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR8B12Q8NGG6 310 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC25A43Q8WUT9 341 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 UQCC2Q9BRT2 126 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 GSX2Q9BZM3 304 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF107Q9UII5 783 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 HDGFL3Q9Y3E1 203 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 NCOA6Q14686 2063 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR6C65A6NJZ3 312 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 H3BUI4 141 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 TP53I11O14683 189 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 PMS2P2O95744 297 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 BPNT1O95861 308 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 CAPZA1P52907 286 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 IL11RAQ14626 422 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 NKPD1Q17RQ9 610 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 RAB12Q6IQ22 244 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 C3P1Q6ZMU1 363 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 C17orf107Q6ZR85 190 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 COMMD7Q86VX2 200 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 EDEM2Q9BV94 578 aa17.29■□□□□ 0.36
CDC42EP1-201ENST00000249014 TEX51A0A1B0GUA7 166 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 HMSDA8MTL9 139 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CYC1P08574 325 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 C4BPBP20851 252 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 TAF13Q15543 124 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 MPPED2Q15777 294 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CDNFQ49AH0 187 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 NHLRC3Q5JS37 347 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 C11orf88Q6PI97 169 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ABHD12BQ7Z5M8 362 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 TRAPPC6BQ86SZ2 158 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CD163Q86VB7 1156 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ANGPTL5Q86XS5 388 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CHST4Q8NCG5 386 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CCDC107Q8WV48 283 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 NUDCD2Q8WVJ2 157 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 IMMP1LQ96LU5 166 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 MOB1AQ9H8S9 216 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 FBXO4Q9UKT5 387 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 COL6A3P12111 3177 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 FXYD6-FXYD2A0A087WZ82 144 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CCDC163A0A0D9SF12 145 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR14I1A6ND48 311 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CCL4P13236 92 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF17P17021 662 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF93P35789 620 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 CLDN17P56750 224 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 HLXQ14774 488 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 LY6G6FQ5SQ64 297 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR52W1Q6IF63 320 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 TMPPEQ6ZT21 453 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 RHOUQ7L0Q8 258 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 COMMD2Q86X83 199 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 EDAQ92838 391 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZBTB8AQ96BR9 441 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 FXYD6Q9H0Q3 95 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 GPR84Q9NQS5 396 aa17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 GPN3Q9UHW5 284 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 NXT1Q9UKK6 140 aaKnown RBP17.28■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF726A6NNF4 738 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 PATE3B3GLJ2 98 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 D6RAR5 112 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 KLF7O75840 302 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 COX6A1P12074 109 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 GNB3P16520 340 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 ZNF20P17024 532 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 POU3F2P20265 443 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 HOXA6P31267 233 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 S100A11P31949 105 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 SLC35A1P78382 337 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 KCNMB1Q16558 191 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 AWAT2Q6E213 333 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 HDDC2Q7Z4H3 204 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 CCDC28AQ8IWP9 274 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 OR5AS1Q8N127 324 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 C12orf45Q8N5I9 185 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 MR1Q95460 341 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 MRGPRFQ96AM1 343 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 GNRHR2Q96P88 292 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 NICN1Q9BSH3 213 aa17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 PTRH2Q9Y3E5 179 aaKnown RBP17.27■□□□□ 0.36
CDC42EP1-201ENST00000249014 LOC102725191A0A1B0GVB3 256 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 TMEM14DPA8MWL7 114 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 PDGFBP01127 241 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 CCL3P10147 92 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 RAB14P61106 215 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 TMEM81Q6P7N7 255 aa17.26■□□□□ 0.35
CDC42EP1-201ENST00000249014 TMUB2Q71RG4 321 aa17.26■□□□□ 0.35
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