RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LHFPL6Q9Y693 200 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 EXPH5Q8NEV8 1989 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 CACNA1EQ15878 2313 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 RER1O15258 196 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 MPGP29372 298 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 AFF3P51826 1226 aaKnown RBP22.68■■□□□ 1.22
RAB40C-201ENST00000248139 COL19A1Q14993 1142 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 PRSS42Q7Z5A4 293 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF101Q8IZC7 436 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 TMEM104Q8NE00 496 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 ZBTB8AQ96BR9 441 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 METTL7AQ9H8H3 244 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 PI4KAP42356 2102 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 C5orf63A6NC05 138 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 METTL21EPA6NDL7 271 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 TSPAN4O14817 238 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 SCRG1O75711 98 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 PMP2P02689 132 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 CD74P04233 296 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF41P51814 821 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-201ENST00000248139 SSBP1Q04837 148 aaKnown RBP22.68■■□□□ 1.22
RAB40C-201ENST00000248139 ZMYND11Q15326 602 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 TOMM20Q15388 145 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 PRAMEF20Q5VT98 475 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 AWAT2Q6E213 333 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 MISPQ8IVT2 679 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 BOLLQ8N9W6 283 aaKnown RBP22.68■■□□□ 1.22
RAB40C-201ENST00000248139 FAM71F1Q96KD3 344 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-201ENST00000248139 BANF2Q9H503 90 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 ASH2LQ9UBL3 628 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 KCNK7Q9Y2U2 307 aa22.68■■□□□ 1.22
RAB40C-201ENST00000248139 AKR1C4P17516 323 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 VAMP1P23763 118 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 EMP2P54851 167 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 CLRN1P58418 232 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 SHBQ15464 509 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 KCTD9Q7L273 389 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 RAB22AQ9UL26 194 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 OR2AT4A6NND4 320 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 NUP62P37198 522 aaPredicted RBP22.67■■□□□ 1.22
RAB40C-201ENST00000248139 CAPZA1P52907 286 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 ATP1B3P54709 279 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 MPPED2Q15777 294 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 C5orf46Q6UWT4 87 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF75AQ96N20 296 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 SEMA5BQ9P283 1151 aa22.67■■□□□ 1.22
RAB40C-201ENST00000248139 DCNP07585 359 aaKnown RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 NAGAP17050 411 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 WDR74Q6RFH5 385 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 ABHD12BQ7Z5M8 362 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 CDH26Q8IXH8 852 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 RPH3AQ9Y2J0 694 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 HOXD4P09016 255 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 LAP3P28838 519 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 PTGDSP41222 190 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 PLPPR5Q32ZL2 321 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 NKAIN3Q8N8D7 197 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 OR5M8Q8NGP6 311 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 EDEM2Q9BV94 578 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 MRPL13Q9BYD1 178 aaKnown RBP22.66■■□□□ 1.22
RAB40C-201ENST00000248139 PFDN2Q9UHV9 154 aa22.66■■□□□ 1.22
RAB40C-201ENST00000248139 A0A1B0GTI1 187 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 HSD11B1P28845 292 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 QRFPP83859 136 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 FAM219AQ8IW50 185 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 FN3KRPQ9HA64 309 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 ALKBH4Q9NXW9 302 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 ADAMTS20P59510 1910 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 NCOA6Q14686 2063 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-201ENST00000248139 TRIOBPQ9H2D6 2365 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 CELA2AP08217 269 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 RPA2P15927 270 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF93P35789 620 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-201ENST00000248139 SMAD4Q13485 552 aaKnown RBP22.65■■□□□ 1.22
RAB40C-201ENST00000248139 TMEM81Q6P7N7 255 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 MYO7BQ6PIF6 2116 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 UEVLDQ8IX04 471 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 ZBTB44Q8NCP5 570 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 OR5M9Q8NGP3 310 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 PPP1R1CQ8WVI7 109 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 TGIF2Q9GZN2 237 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 PRR13Q9NZ81 148 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 B3GALT5Q9Y2C3 310 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 A0A0A6YYD4 124 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 DISC1C4P0D8 188 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 SSX5O60225 188 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 STK17BO94768 372 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 MELTFP08582 738 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 OR3A4PP47883 348 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 NAA40Q86UY6 237 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 SLC22A24Q8N4F4 322 aa22.65■■□□□ 1.22
RAB40C-201ENST00000248139 A0A1W2PQM1 296 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 TUBAL3A6NHL2 446 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 EEF1E1-BLOC1S5C9J1V9 151 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 E9PLN8 166 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 SOCS1O15524 211 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ERCC1P07992 297 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-201ENST00000248139 RAB3AP20336 220 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 LUMP51884 338 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ARHGDIBP52566 201 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms