RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PLGLB1Q02325 96 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 ZNF529Q6P280 563 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 FAM57BQ71RH2 274 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 CDH24Q86UP0 819 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 SLC22A24Q8N4F4 322 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 ATG5Q9H1Y0 275 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 METTL17Q9H7H0 456 aaPredicted RBP20.49■□□□□ 0.87
MSX2-201ENST00000239243 TAS2R8Q9NYW2 309 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 KLK11Q9UBX7 282 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 SLC5A6Q9Y289 635 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 N6AMT1Q9Y5N5 214 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 SPAARA0A1B0GVQ0 90 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 SLC2A1P11166 492 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 MDS2Q8NDY4 140 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 TMEM45BQ96B21 275 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 ZNF775Q96BV0 537 aaPredicted RBP20.49■□□□□ 0.87
MSX2-201ENST00000239243 PGAM5Q96HS1 289 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 CRLF2Q9HC73 371 aa20.49■□□□□ 0.87
MSX2-201ENST00000239243 PAQR5Q9NXK6 330 aaPredicted RBP20.49■□□□□ 0.87
MSX2-201ENST00000239243 CIB4A0PJX0 185 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 MT-ND4P03905 459 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 LHX2P50458 406 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 MEIOBQ8N635 442 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 SPTSSAQ969W0 71 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 HRASLSQ9HDD0 168 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 OTOGLQ3ZCN5 2332 aa20.48■□□□□ 0.87
MSX2-201ENST00000239243 RBBP9O75884 186 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CST2P09228 141 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CD46P15529 392 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 RAB6AP20340 208 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 OTX1P32242 354 aaPredicted RBP20.47■□□□□ 0.87
MSX2-201ENST00000239243 MAGEA5P43359 124 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 SOX8P57073 446 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CBX3Q13185 183 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 HYAL4Q2M3T9 481 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CCDC92Q53HC0 331 aaPredicted RBP20.47■□□□□ 0.87
MSX2-201ENST00000239243 BTN2A1Q7KYR7 527 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 TMEM38BQ9NVV0 291 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 PLEK2Q9NYT0 353 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 LDLRAD4O15165 306 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 RFC3P40938 356 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 RRAS2P62070 204 aaPredicted RBP20.47■□□□□ 0.87
MSX2-201ENST00000239243 ZFP69Q49AA0 526 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 OLFML2AQ68BL7 652 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 GALNTL5Q7Z4T8 443 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CDH26Q8IXH8 852 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 TMEM251Q8N6I4 163 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 CCDC54Q8NEL0 328 aa20.47■□□□□ 0.87
MSX2-201ENST00000239243 AKAP1Q92667 903 aaKnown RBP eCLIP20.47■□□□□ 0.87
MSX2-201ENST00000239243 ZNF845Q96IR2 970 aaPredicted RBP20.47■□□□□ 0.87
MSX2-201ENST00000239243 TRAV6A0A075B6T7 132 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 TRAV18A0A075B6X5 111 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 A0A0U1RQV5 110 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 FAM166BA8MTA8 275 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 H7C417 338 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 FAUP35544 74 aaKnown RBP20.46■□□□□ 0.87
MSX2-201ENST00000239243 SSBP1Q04837 148 aaKnown RBP20.46■□□□□ 0.87
MSX2-201ENST00000239243 OR13C9Q8NGT0 318 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 NEK6Q9HC98 313 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 MTFP1Q9UDX5 166 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 IGKV3D-15A0A087WSY6 115 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 ARGFXA6NJG6 315 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 ZNF708P17019 499 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 NTF4P34130 210 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 SLC6A9P48067 706 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 MEOX1P50221 254 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 CLDN18P56856 261 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 RAB25P57735 213 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 SCRN3Q0VDG4 424 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 ECH1Q13011 328 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 RAB35Q15286 201 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 OR52N4Q8NGI2 321 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 OR56B4Q8NH76 319 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 FBXO17Q96EF6 278 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 ZNF837Q96EG3 531 aaPredicted RBP20.46■□□□□ 0.87
MSX2-201ENST00000239243 FAM71F1Q96KD3 344 aaPredicted RBP20.46■□□□□ 0.87
MSX2-201ENST00000239243 KCNK15Q9H427 330 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 ZNF319Q9P2F9 582 aa20.46■□□□□ 0.87
MSX2-201ENST00000239243 C7orf66A4D0T2 115 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 F5H5K5 113 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 SYNGR4O95473 234 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 IGLV3-1P01715 115 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 CELA3AP09093 270 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 PRSS3P35030 304 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 CCR6P51684 374 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 TGIF1Q15583 401 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 BCL2A1Q16548 175 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 OR4D6Q8NGJ1 314 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 ABHD3Q8WU67 409 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 SCMH1Q96GD3 660 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 ALKBH3Q96Q83 286 aaPredicted RBP20.45■□□□□ 0.86
MSX2-201ENST00000239243 CNTD2Q9H8S5 307 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 MRPL15Q9P015 296 aaKnown RBP20.45■□□□□ 0.86
MSX2-201ENST00000239243 EMC3Q9P0I2 261 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 RHBDD3Q9Y3P4 386 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 METTL21EPA6NDL7 271 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 M0R135 149 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 SULT1C2O00338 296 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 KDM4BO94953 1096 aa20.45■□□□□ 0.86
MSX2-201ENST00000239243 BPNT1O95861 308 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms