RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CXCR1P25024 350 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 GABRA4P48169 554 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 POLR2HP52434 150 aaKnown RBP11.68□□□□□ -0.54
MSH2-201ENST00000233146 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 MLC1Q15049 377 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 METRNLQ641Q3 311 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 NOXO1Q8NFA2 376 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OR9A1PQ8NGU1 263 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 ELOVL1Q9BW60 279 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 MDC1Q14676 2089 aaKnown RBP11.67□□□□□ -0.54
MSH2-201ENST00000233146 H0YL77 283 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 RPS24P62847 133 aaKnown RBP11.67□□□□□ -0.54
MSH2-201ENST00000233146 LMAN2Q12907 356 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 ZNF321PQ8N8H1 164 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 LFNGQ8NES3 379 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 C2orf15Q8WU43 125 aaKnown RBP11.67□□□□□ -0.54
MSH2-201ENST00000233146 Q96M85 177 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 PRAP1Q96NZ9 151 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 KLHL28Q9NXS3 571 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 CASTOR2A6NHX0 329 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 MASP2O00187 686 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 MMP3P08254 477 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 NPPBP16860 134 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 RND2P52198 227 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 SPEM2Q0P670 501 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 C10orf120Q5SQS8 335 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 KDM8Q8N371 416 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 OR51L1Q8NGJ5 315 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 OR13C9Q8NGT0 318 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 ZNF417Q8TAU3 575 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 FAM174AQ8TBP5 190 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 FBXO32Q969P5 355 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 SGPP1Q9BX95 441 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 SLC26A1Q9H2B4 701 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 RAB22AQ9UL26 194 aa11.67□□□□□ -0.54
MSH2-201ENST00000233146 FTCDNL1E5RQL4 147 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 SCGNO76038 276 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 RHOCP08134 193 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 PSRC1Q6PGN9 363 aaPredicted RBP11.66□□□□□ -0.54
MSH2-201ENST00000233146 VHLLQ6RSH7 139 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 ZNF627Q7L945 461 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 PRSS16Q9NQE7 514 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 SLC38A8A6NNN8 435 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 PRR32B1ATL7 298 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 HPRT1P00492 218 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 PDLIM4P50479 330 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 TNFSF10P50591 281 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 RAB7AP51149 207 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 COL5A1-AS1Q5SY13 56 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 ZNF584Q8IVC4 421 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 RNF128Q8TEB7 428 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 HAS2Q92819 552 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 C2orf50Q96LR7 162 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 GLIPR2Q9H4G4 154 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 TMEM238C9JI98 176 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 PLPP1O14494 284 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 FCMRO60667 390 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
MSH2-201ENST00000233146 KLK2P20151 261 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 RPL12P30050 165 aaKnown RBP11.66□□□□□ -0.54
MSH2-201ENST00000233146 PRKAG1P54619 331 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 LASP1Q14847 261 aaKnown RBP11.66□□□□□ -0.54
MSH2-201ENST00000233146 ZNF429Q86V71 674 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 MFSD9Q8NBP5 474 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 SLC41A2Q96JW4 573 aa11.66□□□□□ -0.54
MSH2-201ENST00000233146 STRAPQ9Y3F4 350 aaKnown RBP11.66□□□□□ -0.54
MSH2-201ENST00000233146 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 GRM6O15303 877 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 LCATP04180 440 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 FCGR2CP31995 323 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
MSH2-201ENST00000233146 TMEM33P57088 247 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 TAS2R31P59538 309 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 RAB11BQ15907 218 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 OR4C11Q6IEV9 310 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 MDGA2Q7Z553 956 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 NKAIN3Q8N8D7 197 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 AGBL5Q8NDL9 886 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 ZNF740Q8NDX6 193 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
MSH2-201ENST00000233146 CMBLQ96DG6 245 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 CCDC74BQ96LY2 380 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 OR11A1Q9GZK7 315 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
MSH2-201ENST00000233146 OSGIN2Q9Y236 505 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 OPN1LWP04000 364 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 UMODP07911 640 aa11.65□□□□□ -0.54
MSH2-201ENST00000233146 CCKARP32238 428 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms