RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CD14P08571 375 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 HOXC4P09017 264 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 TSFMP43897 325 aaKnown RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 HSD17B7P56937 341 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 PKIAP61925 76 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 GPR18Q14330 331 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 RNASE10Q5GAN6 216 aaKnown RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 OR56B1Q8NGI3 324 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC25A44Q96H78 314 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 PARPBPQ9NWS1 579 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 A0A087WUJ7 227 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 PNPP00491 289 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 PAX6P26367 422 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 IGFALSP35858 605 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 KIR3DL2P43630 455 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 EIF1AXP47813 144 aaKnown RBP12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 CSNK1A1LQ8N752 337 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 STACQ99469 402 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 APOOQ9BUR5 198 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 CACFD1Q9UGQ2 172 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 B9D1Q9UPM9 204 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 VSIG4Q9Y279 399 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 RP1P56715 2156 aa12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.37
PCDHB3-201ENST00000231130 CDC14CA4D256 554 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 ERCC1P07992 297 aaPredicted RBP12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 HOXB5P09067 269 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 HOXA5P20719 270 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 GNALP38405 381 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 DNASE1L1P49184 302 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 BTG2P78543 158 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 RPL18Q07020 188 aaKnown RBP12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 ADAD2Q8NCV1 583 aaKnown RBP12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 MFSD8Q8NHS3 518 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 KTI12Q96EK9 354 aaPredicted RBP12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 SPACA5Q96QH8 159 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 KCNJ16Q9NPI9 418 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 LAMA1P25391 3075 aa12.71□□□□□ -0.38
PCDHB3-201ENST00000231130 NUDT19A8MXV4 375 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 CD8AP01732 235 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 ITGB2P05107 769 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC25A4P12235 298 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 HTR2CP28335 458 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 FAM78AQ5JUQ0 283 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 EIF5AL1Q6IS14 154 aaKnown RBP12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 RTN4RL2Q86UN3 420 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 TOX2Q96NM4 488 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 LPAR4Q99677 370 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 CKLFQ9UBR5 152 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 WIF1Q9Y5W5 379 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 MSGN1A6NI15 193 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 LMX1BO60663 402 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 KAT7O95251 611 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 IFNA6P05013 189 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 PRPS1P60891 318 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 RAP1AP62834 184 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC35D3Q5M8T2 416 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 RPL7L1Q6DKI1 246 aaKnown RBP12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 OR1E3Q8WZA6 343 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 TIMM29Q9BSF4 260 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF426Q9BUY5 554 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 MRI1Q9BV20 369 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 CHST5Q9GZS9 411 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 Q9N2J8 555 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 A0A087WZY1 265 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 C9orf170A2RU37 121 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 XKRYO14609 159 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 RENP00797 406 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 IFNA10P01566 189 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 HCKP08631 526 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 MST1LQ2TV78 715 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 MESTQ5EB52 335 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 BHLHE23Q8NDY6 225 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 OR13C8Q8NGS7 320 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 GPX8Q8TED1 209 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 CYYR1Q96J86 154 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 TAF9BQ9HBM6 251 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 CENPMQ9NSP4 180 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 FBXL21Q9UKT6 434 aa12.7□□□□□ -0.38
PCDHB3-201ENST00000231130 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms