RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 FNDC7Q5VTL7 733 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 C3orf33Q6P1S2 294 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 UNQ6494/PRO21346Q6UXR6 183 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 TSEN15Q8WW01 171 aaKnown RBP8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 TMEM41AQ96HV5 264 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 ADOQ96SZ5 270 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 NXF5Q9H1B4 397 aaKnown RBP8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 APMAPQ9HDC9 416 aa8.44□□□□□ -1.06
HLA-DOA-201ENST00000229829 TRAV14DV4A0A0A6YYC5 116 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 A0A1B0GTQ1 180 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 CYTIPO60759 359 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 HLA-DQA2P01906 255 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 IFI6P09912 130 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 MAPK3P27361 379 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 CASRP41180 1078 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 SURF2Q15527 256 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 MICBQ29980 383 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 JMJD6Q6NYC1 403 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ANKRD16Q6P6B7 361 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZNF227Q86WZ6 799 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZNF563Q8TA94 476 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 GPR148Q8TDV2 347 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 CCDC107Q8WV48 283 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 MCHR2Q969V1 340 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZBTB8AQ96BR9 441 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ATG5Q9H1Y0 275 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ELOVL3Q9HB03 270 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 DNAJB11Q9UBS4 358 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ASXL3Q9C0F0 2248 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 COLCA2A8K830 154 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 C17orf105B2RV13 164 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 AP4M1O00189 453 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 IGLV3-21P80748 117 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 DLX2Q07687 328 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 SQSTM1Q13501 440 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 GAMTQ14353 236 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 ARMC6Q6NXE6 501 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 CHRDL2Q6WN34 429 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 LRP11Q86VZ4 500 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 KCNRGQ8N5I3 272 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 FAM160A2Q8N612 972 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 C4orf45Q96LM5 186 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 NECAB3Q96P71 396 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 NRIP2Q9BQI9 281 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 COMMD4Q9H0A8 199 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 SMOC1Q9H4F8 434 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 PNO1Q9NRX1 252 aaKnown RBP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 PISDQ9UG56 409 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 PUS1Q9Y606 427 aaKnown RBP eCLIP8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 THADAQ6YHU6 1953 aa8.43□□□□□ -1.06
HLA-DOA-201ENST00000229829 CCDC163A0A0D9SF12 145 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 TCRBV21S2A2A0A5A6 115 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ARGFXA6NJG6 315 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZNF705GA8MUZ8 300 aaPredicted RBP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 CLDN4O14493 209 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZNF264O43296 627 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 MBP02144 154 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 GUSBP08236 651 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 OR8U8P0C7N1 319 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 CALCRP30988 508 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 AKT2P31751 481 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 EBPQ15125 230 aaKnown RBP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ARHGAP40Q5TG30 622 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 C11orf87Q6NUJ2 197 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 OR4A4PQ8NGN8 299 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 OR14K1Q8NGZ2 314 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 GTF3AQ92664 365 aaKnown RBP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 FAM3DQ96BQ1 224 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 MRPL38Q96DV4 380 aaKnown RBP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 C14orf144Q96I85 54 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 DCBLD2Q96PD2 775 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 INTS14Q96SY0 518 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 OR8D2Q9GZM6 311 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 UBQLN4Q9NRR5 601 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 TREM2Q9NZC2 230 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 MRPS33Q9Y291 106 aaKnown RBP8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 FAM221BA6H8Z2 402 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 RNASEK-C17orf49H0YIS7 233 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 IGHV4-34P06331 123 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 PNMTP11086 282 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 RAB5CP51148 216 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 YPEL5P62699 121 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 C14orf28Q4W4Y0 310 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 NUP210LQ5VU65 1888 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 OR2A2Q6IF42 318 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 STEAP1BQ6NZ63 245 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 CHST4Q8NCG5 386 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 GUCD1Q96NT3 240 aa8.42□□□□□ -1.06
HLA-DOA-201ENST00000229829 MRI1Q9BV20 369 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms