RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NPIPB7O75200 414 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 MTRF1O75570 445 aaKnown RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 DDAH2O95865 285 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 CRYBA1P05813 215 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 GNALP38405 381 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 GFERP55789 205 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 B2MP61769 119 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 KIR2DS5Q14953 304 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 DHRS7BQ6IAN0 325 aaPredicted RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 ETV3LQ6ZN32 361 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 CCDC36Q8IYA8 594 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 STOML3Q8TAV4 291 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 THRSPQ92748 146 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 ASXL3Q9C0F0 2248 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 TMED7-TICAM2A0A0A6YYA0 188 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 DUS4LO95620 317 aaKnown RBP11.04□□□□□ -0.64
NUP88-201ENST00000225696 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 IGHV4-34P06331 123 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 AKT2P31751 481 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 GABRA4P48169 554 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 NPY4RP50391 375 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 GLO1Q04760 184 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 FZD2Q14332 565 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 SLC9A3R2Q15599 337 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 C1orf140Q5VVS0 124 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 C16orf47Q6ZP98 133 aaPredicted RBP11.04□□□□□ -0.64
NUP88-201ENST00000225696 RAB11FIP2Q7L804 512 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 ZDHHC22Q8N966 263 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 TMEM104Q8NE00 496 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 SLC30A7Q8NEW0 376 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 OR51F2Q8NH61 342 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 ZNF721Q8TF20 911 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 TMEM230Q96A57 120 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 TREM1Q9NP99 234 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
NUP88-201ENST00000225696 RAB22AQ9UL26 194 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 THADAQ6YHU6 1953 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 A0A0A6YYH2 397 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 IGHV5-51A0A0C4DH38 117 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 A0A1W2PP11 408 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 A6NJ64 397 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 ISG15P05161 165 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 RFC3P40938 356 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 YPEL5P62699 121 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
NUP88-201ENST00000225696 SGCAQ16586 387 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 MICBQ29980 383 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 PHF19Q5T6S3 580 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 ARL5BQ96KC2 179 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 HRH4Q9H3N8 390 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 C5orf66Q9H5L9 145 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 OR2S2Q9NQN1 319 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 UQCC1Q9NVA1 299 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 MED29Q9NX70 200 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 CTSFQ9UBX1 484 aa11.04□□□□□ -0.64
NUP88-201ENST00000225696 CARHSP1Q9Y2V2 147 aaKnown RBP11.04□□□□□ -0.64
NUP88-201ENST00000225696 TRBV6-7A0A0A0MS04 114 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 METTL21EPA6NDL7 271 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 FRG2CA6NGY1 282 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 C9JQL5 133 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 RAD51DO75771 328 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 FARS2O95363 451 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 TTRP02766 147 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 MPZP25189 248 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 CTHP32929 405 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 RORAP35398 523 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 CBX5P45973 191 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 ID4P47928 161 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 AIMP2Q13155 320 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 PLAC9Q5JTB6 97 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 SLC29A4Q7RTT9 530 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 HOGA1Q86XE5 327 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 OR13C9Q8NGT0 318 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 PTX4Q96A99 478 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 SLC46A1Q96NT5 459 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 MESP1Q9BRJ9 268 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 SDK1Q7Z5N4 2213 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 TMEM131Q92545 1883 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 SOCS1O15524 211 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 NUDT21O43809 227 aaKnown RBP11.03□□□□□ -0.64
NUP88-201ENST00000225696 GP1BBP13224 206 aa11.03□□□□□ -0.64
NUP88-201ENST00000225696 CTSEP14091 401 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms