RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C4orf45Q96LM5 186 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 NGBQ9NPG2 151 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 TBCCD1Q9NVR7 557 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF319Q9P2F9 582 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 OR52A1Q9UKL2 312 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 IGHV2OR16-5A0A0B4J2B6 119 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 TUBAL3A6NHL2 446 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 OR4C45A6NMZ5 311 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 LOC110117498-PIK3R3F6TDL0 507 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 C19orf84I3L1E1 186 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 CD40P25942 277 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 RGS6P49758 472 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF83P51522 516 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 TMEM108Q6UXF1 575 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 DMRTC2Q8IXT2 367 aaPredicted RBP12.14□□□□□ -0.47
SEC61B-201ENST00000223641 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 PPP1R14AQ96A00 147 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 SMIM19Q96E16 107 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 SP140LQ9H930 580 aa12.14□□□□□ -0.47
SEC61B-201ENST00000223641 SF3B6Q9Y3B4 125 aaKnown RBP12.14□□□□□ -0.47
SEC61B-201ENST00000223641 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
SEC61B-201ENST00000223641 TRBV2A0A0J9YWF9 115 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 A0A0U1RQV5 110 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 C5orf63A6NC05 138 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 M0R1B8 84 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 ZFPL1O95159 310 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 TTRP02766 147 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 ISG15P05161 165 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 HSMCR30P0CW71 290 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 SLC2A1P11166 492 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 CD53P19397 219 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 CELP19835 753 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 PSMB9P28065 219 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 CALCRP30988 508 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 LIPAP38571 399 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 RPL5P46777 297 aaKnown RBP12.13□□□□□ -0.47
SEC61B-201ENST00000223641 SNTB1Q13884 538 aaKnown RBP12.13□□□□□ -0.47
SEC61B-201ENST00000223641 SSX1Q16384 188 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 SNAI3Q3KNW1 292 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF544Q6NX49 715 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 Q6ZSR3 168 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 WFDC8Q8IUA0 241 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 PHC2Q8IXK0 858 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 OR8B12Q8NGG6 310 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 OR13F1Q8NGS4 319 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
SEC61B-201ENST00000223641 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
SEC61B-201ENST00000223641 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 SLC22A13Q9Y226 551 aa12.13□□□□□ -0.47
SEC61B-201ENST00000223641 TMEM212A6NML5 194 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 CCRL2O00421 344 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 GPRIN2O60269 458 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 NGFP01138 241 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 CRYAAP02489 173 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 LCATP04180 440 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 ANXA2P07355 339 aaKnown RBP12.12□□□□□ -0.47
SEC61B-201ENST00000223641 CCNOP22674 350 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 SLC6A9P48067 706 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 UCP2P55851 309 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 BLMHQ13867 455 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 TSTQ16762 297 aaKnown RBP12.12□□□□□ -0.47
SEC61B-201ENST00000223641 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 LIPKQ5VXJ0 399 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 ARL9Q6T311 187 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
SEC61B-201ENST00000223641 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 UFD1Q92890 307 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 SPSB4Q96A44 273 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF391Q9UJN7 358 aa12.12□□□□□ -0.47
SEC61B-201ENST00000223641 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 SIAH2O43255 324 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 SMPD2O60906 423 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 UBCP0CG48 685 aaKnown RBP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 CCL1P22362 96 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 TUBG1P23258 451 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 TGFBR2P37173 567 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 KIR2DL3P43628 341 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 BSPH1Q075Z2 132 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 GHSRQ92847 366 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 SGK3Q96BR1 496 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 YIPF6Q96EC8 236 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms