RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 OR6V1Q8N148 313 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 RCN3Q96D15 328 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 HSH2DQ96JZ2 352 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.32
NME3-201ENST00000219302 TBX15Q96SF7 602 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 CTSZQ9UBR2 303 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 RPS6KA6Q9UK32 745 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 TMCC3Q9ULS5 477 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 B9D1Q9UPM9 204 aa13.08□□□□□ -0.32
NME3-201ENST00000219302 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 ZNF879B4DU55 563 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 P2RY10O00398 339 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 FAM20BO75063 409 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 PPP1R3DO95685 299 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 SFTPBP07988 381 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 IRF2P14316 349 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 CRABP1P29762 137 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 NPY4RP50391 375 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 DBPQ10586 325 aaPredicted RBP13.07□□□□□ -0.32
NME3-201ENST00000219302 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
NME3-201ENST00000219302 SLC26A10Q8NG04 563 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 POLR1DQ9Y2S0 133 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 POMT1Q9Y6A1 747 aa13.07□□□□□ -0.32
NME3-201ENST00000219302 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 SERPINA1P01009 418 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 LIPFP07098 398 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 RPS6KA3P51812 740 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 SEC23BQ15437 767 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 CD276Q5ZPR3 534 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 ASPHD2Q6ICH7 369 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 SLC18B1Q6NT16 456 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 C8orf82Q6P1X6 216 aaPredicted RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 CFAP77Q6ZQR2 320 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 ARPINQ7Z6K5 226 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 CYP4Z1Q86W10 505 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 OR11L1Q8NGX0 322 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 FUZQ9BT04 418 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 SRA1Q9HD15 236 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 PNRC2Q9NPJ4 139 aaKnown RBP13.06□□□□□ -0.32
NME3-201ENST00000219302 UFSP2Q9NUQ7 469 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 NDUFAF4Q9P032 175 aa13.06□□□□□ -0.32
NME3-201ENST00000219302 UNC119BA6NIH7 251 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 F5H5K5 113 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 LGALS8O00214 317 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 NME4O00746 187 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 FCN3O75636 299 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 TOX4O94842 621 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.32
NME3-201ENST00000219302 GGT2P36268 569 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 CENPAP49450 140 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 RPL15P61313 204 aaKnown RBP13.05□□□□□ -0.32
NME3-201ENST00000219302 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 ZNF620Q6ZNG0 422 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 SSMEM1Q8WWF3 244 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 C7orf34Q96L11 122 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 WDFY2Q96P53 400 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 CCT8L2Q96SF2 557 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 MMP27Q9H306 513 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 FGFR1OP2Q9NVK5 253 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 ERVK-18Q9QC07 812 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 RNF7Q9UBF6 113 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 CYB5R1Q9UHQ9 305 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 CAPN7Q9Y6W3 813 aa13.05□□□□□ -0.32
NME3-201ENST00000219302 TRBV4-1A0A0J9YWV2 114 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 M0QZ24 198 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 ARPC3O15145 178 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 GSTA4O15217 222 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 SLC22A2O15244 555 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 CLPXO76031 633 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 LCATP04180 440 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 RHCEP18577 417 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 GSK3BP49841 420 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 SLC7A2P52569 658 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 TRAP1Q12931 704 aaKnown RBP13.04□□□□□ -0.32
NME3-201ENST00000219302 ECH1Q13011 328 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
NME3-201ENST00000219302 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 SMARCD3Q6STE5 483 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 HDXQ7Z353 690 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 ZBTB46Q86UZ6 589 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 PLPP7Q8NBV4 271 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 RP9Q8TA86 221 aaKnown RBP13.04□□□□□ -0.32
NME3-201ENST00000219302 GATAD2BQ8WXI9 593 aa13.04□□□□□ -0.32
NME3-201ENST00000219302 DYRK2Q92630 601 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms