RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 USP22Q9UPT9 525 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 POM121CA8CG34 1229 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FAM171A2A8MVW0 826 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 H7BYZ3 331 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 DOK2O60496 412 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SCRG1O75711 98 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 DUS4LO95620 317 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 SLC6A1P30531 599 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FUT6P51993 359 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 KIAA0141Q14154 515 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 TMEM176BQ3YBM2 270 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 PYCR3Q53H96 274 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SOWAHCQ53LP3 525 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 FAM78AQ5JUQ0 283 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SIGIRRQ6IA17 410 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ANKRD33Q7Z3H0 272 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TMPRSS9Q7Z410 1059 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 PRSS42Q7Z5A4 293 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 CMTM4Q8IZR5 234 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 OR13C9Q8NGT0 318 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SFT2D1Q8WV19 159 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 NEIL1Q96FI4 390 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 MS4A4AQ96JQ5 239 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 RAB40CQ96S21 281 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 OCEL1Q9H607 264 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 UBE2ZQ9H832 354 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 LMAN1LQ9HAT1 526 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SERTAD4Q9NUC0 356 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FKBP11Q9NYL4 201 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 A0A1B0GTW7 788 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 MEIS3P2A8K0S8 358 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TUSC2O75896 110 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 GJA4P35212 333 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TPPP2P59282 170 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 C19orf57Q0VDD7 668 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 DUSP5Q16690 384 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ESPNLQ6ZVH7 1005 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ST7LQ8TDW4 575 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 THAP3Q8WTV1 239 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 PTX4Q96A99 478 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FN3KRPQ9HA64 309 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FLVCR1Q9Y5Y0 555 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TNS1Q9HBL0 1735 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 A6NCN8 305 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ANKUB1A6NFN9 424 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FZD6O60353 706 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 NME2P22392 152 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 NPY4RP50391 375 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 P2RX3P56373 397 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 PHYHD1Q5SRE7 291 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SHEQ5VZ18 495 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SSX8Q7RTT4 187 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 HMGN2P46Q86SG4 172 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 OR52N5Q8NH56 324 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 IL1F10Q8WWZ1 152 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TMPRSS5Q9H3S3 457 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SIRT7Q9NRC8 400 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 TUBG2Q9NRH3 451 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 VSX1Q9NZR4 365 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 TMEFF2Q9UIK5 374 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 PTRH2Q9Y3E5 179 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 A0A0B4J2E0 115 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 A0A1B0GX12 115 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SCAMP1O15126 338 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 NXPH2O95156 264 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 FBP1P09467 338 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 RRASP10301 218 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ARSAP15289 507 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SLC19A1P41440 591 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SUMO1P63165 101 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 DGCR2P98153 550 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 EIF3IQ13347 325 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 ADIRFQ15847 76 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 HGDQ93099 445 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ANAPC16Q96DE5 110 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 NEURL2Q9BR09 285 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SMIM3Q9BZL3 60 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 HINT3Q9NQE9 182 aaKnown RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 LRIT1Q9P2V4 623 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SLC17A4Q9Y2C5 497 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ARHGEF17Q96PE2 2063 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 DBHP09172 617 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 CD27P26842 260 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 PSMB5P28074 263 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 HRH1P35367 487 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 CSN1S1P47710 185 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 CAPZBP47756 277 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 PXNP49023 591 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 STK11Q15831 433 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 ATP6V1FQ16864 119 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SMIM21Q3B7S5 101 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 LGALSLQ3ZCW2 172 aaPredicted RBP4.01□□□□□ -1.77
CHD9-201ENST00000219084 TMEM71Q6P5X7 295 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 PLPP7Q8NBV4 271 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SLC16A11Q8NCK7 471 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 OR2G2Q8NGZ5 317 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 RASD2Q96D21 266 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 SLAMF6Q96DU3 332 aa4.01□□□□□ -1.77
CHD9-201ENST00000219084 C12orf57Q99622 126 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms