RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GPX8Q8TED1 209 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 EDAQ92838 391 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 SNX22Q96L94 193 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 PLEKHB1Q9UF11 243 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 C7orf77A4D0Y5 90 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 YIF1AO95070 293 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 LIMK1P53667 647 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ZNF85Q03923 595 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 ELAVL1Q15717 326 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 CYB5R2Q6BCY4 276 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ADAMTSL4Q6UY14 1074 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 SYS1Q8N2H4 156 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 SLC39A7Q92504 469 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 NXPE3Q969Y0 559 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 Q96M85 177 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 NOL4LQ96MY1 436 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 HDAC8Q9BY41 377 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 OBP2AQ9NY56 170 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 UBR2Q8IWV8 1755 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 TBX19O60806 448 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 OPN1LWP04000 364 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 INSL4Q14641 139 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 PLGLAQ15195 96 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 LPAL2Q16609 132 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 TCTN3Q6NUS6 607 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 OVCH2Q7RTZ1 564 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 C19orf47Q8N9M1 422 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 PDXPQ96GD0 296 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 TAAR9Q96RI9 348 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 IER2Q9BTL4 223 aa9.51□□□□□ -0.89
VCL-201ENST00000211998 ESRP2Q9H6T0 727 aaKnown RBP9.51□□□□□ -0.89
VCL-201ENST00000211998 DTYMKP23919 212 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.5□□□□□ -0.89
VCL-201ENST00000211998 LRP11Q86VZ4 500 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 OR5M9Q8NGP3 310 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 OR4A16Q8NH70 328 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 TRAPPC2LQ9UL33 140 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 PLSCR5A0PG75 271 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 CHEK1O14757 476 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ATF1P18846 271 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 TRIM61Q5EBN2 209 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 MMP21Q8N119 569 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 EXD3Q8N9H8 876 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 PIGTQ969N2 578 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ADAT1Q9BUB4 502 aaKnown RBP9.5□□□□□ -0.89
VCL-201ENST00000211998 TMEM9BQ9NQ34 198 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 NTNG1Q9Y2I2 539 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 YTHDF2Q9Y5A9 579 aaKnown RBP9.5□□□□□ -0.89
VCL-201ENST00000211998 H0YGG7 62 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 SPNS2Q8IVW8 549 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ZNF740Q8NDX6 193 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ZC3HAV1LQ96H79 300 aaKnown RBP9.5□□□□□ -0.89
VCL-201ENST00000211998 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ASB1Q9Y576 335 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 H3BNC9 293 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 SLC2A1P11166 492 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 TBPP20226 339 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 CD200P41217 278 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 GABRA4P48169 554 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 ZNF750Q32MQ0 723 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 SPANXN5Q5MJ07 72 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
VCL-201ENST00000211998 MAGT1Q9H0U3 335 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
VCL-201ENST00000211998 RCL1Q9Y2P8 373 aaKnown RBP9.5□□□□□ -0.89
VCL-201ENST00000211998 FAM74A7A6NL05 159 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HMGN4O00479 90 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PLA2G10O15496 165 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HIST1H1CP16403 213 aaKnown RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 PFN3P60673 137 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MAT1AQ00266 395 aaKnown RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 TIGITQ495A1 244 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 FAM74A3Q4VXF1 159 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF687Q8N1G0 1237 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 OR51H1Q8NH63 302 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 CHAC2Q8WUX2 184 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MSL2Q9HCI7 577 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 FKBP11Q9NYL4 201 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MYOTQ9UBF9 498 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 FOXJ3Q9UPW0 622 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MED19A0JLT2 244 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 SIAH2O43255 324 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MPC2O95563 127 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HEXAP06865 529 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PVRP15151 417 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PRPH2P23942 346 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PXNP49023 591 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 SULT1A1P50225 295 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PYCR3Q53H96 274 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms