RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SLC26A10Q8NG04 563 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 OR10R2Q8NGX6 335 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 THRSPQ92748 146 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 PIK3IP1Q96FE7 263 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 FBXO9Q9UK97 447 aaPredicted RBP12.51□□□□□ -0.41
USH1C-201ENST00000005226 RAB22AQ9UL26 194 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 ZNF175Q9Y473 711 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 HS3ST3A1Q9Y663 406 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 PIAS3Q9Y6X2 628 aa12.51□□□□□ -0.41
USH1C-201ENST00000005226 IGHV3-20A0A0C4DH32 117 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 TTLL8A6PVC2 850 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 TMEM150CB9EJG8 249 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 PRAMEF26H0Y7S4 382 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 IL2RAP01589 272 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 IGKV3-11P04433 115 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 EBPQ15125 230 aaKnown RBP12.5□□□□□ -0.41
USH1C-201ENST00000005226 HFEQ30201 348 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 HLA-DQA1Q5Y7H0 255 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 ZSCAN4Q8NAM6 433 aaPredicted RBP12.5□□□□□ -0.41
USH1C-201ENST00000005226 OR4K17Q8NGC6 315 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
USH1C-201ENST00000005226 BANF2Q9H503 90 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 BRWD1Q9NSI6 2320 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 MS4A18H0YCH9 400 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 NPIPB7O75200 414 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 CRHP06850 196 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 MS4A18Q3C1V0 323 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 NKAPLQ5M9Q1 402 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 ANGPTL5Q86XS5 388 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 ESRP2Q9H6T0 727 aaKnown RBP12.5□□□□□ -0.41
USH1C-201ENST00000005226 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
USH1C-201ENST00000005226 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
USH1C-201ENST00000005226 A8MVM7 634 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 AHSA1O95433 338 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 ABCD3P28288 659 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
USH1C-201ENST00000005226 SLC26A5P58743 744 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 NSDHLQ15738 373 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 H3F3CQ6NXT2 135 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 CCDC36Q8IYA8 594 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 ZNF101Q8IZC7 436 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 ZNF784Q8NCA9 323 aaPredicted RBP12.49□□□□□ -0.41
USH1C-201ENST00000005226 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 HRH4Q9H3N8 390 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 CYTL1Q9NRR1 136 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
USH1C-201ENST00000005226 ZNF98A6NK75 572 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 SOCS1O15524 211 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 TSPAN2O60636 221 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 TTRP02766 147 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 CD37P11049 281 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 ABOP16442 354 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
USH1C-201ENST00000005226 AIMP2Q13155 320 aaKnown RBP12.49□□□□□ -0.41
USH1C-201ENST00000005226 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 FOXRED2Q8IWF2 684 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 OR4K15Q8NH41 348 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 MAFIPQ8WZ33 124 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 FBRSQ9HAH7 460 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 OR5AC2Q9NZP5 309 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 VDAC3Q9Y277 283 aa12.49□□□□□ -0.41
USH1C-201ENST00000005226 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 LOC390937A0A1W2PQ73 354 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 ZNF705EA8MWA4 302 aaPredicted RBP12.48□□□□□ -0.41
USH1C-201ENST00000005226 ALG1L2C9J202 215 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 AGPAT2O15120 278 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 MT-ATP6P00846 226 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 HLA-GP17693 338 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
USH1C-201ENST00000005226 BCKDHBP21953 392 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 CAPZBP47756 277 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 QRFPP83859 136 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 MICBQ29980 383 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 AWAT2Q6E213 333 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 SVBPQ8N300 66 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
USH1C-201ENST00000005226 CUTCQ9NTM9 273 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 SLC2A8Q9NY64 477 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 FGF16O43320 207 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 SYT7O43581 403 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 FARS2O95363 451 aaKnown RBP12.48□□□□□ -0.41
USH1C-201ENST00000005226 MPIG6BO95866 241 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 CRABP1P29762 137 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 HYAL1Q12794 435 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 SGCAQ16586 387 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 TMEM244Q5VVB8 128 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
USH1C-201ENST00000005226 LANCL3Q6ZV70 420 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms