RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Svs6Q64356 99 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Hist2h2abQ64522 130 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tdpoz5Q6YCH1 340 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Zfp429Q7M6Y0 485 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr1225Q7TR01 311 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm13757Q7TR17 305 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 QpctlQ8BH73 383 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Rhbdd1Q8BHC7 315 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Katnal1Q8K0T4 488 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tor2aQ8R1J9 321 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr486Q8VFD0 314 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Cyyr1Q8VIH7 165 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Cotl1Q9CQI6 142 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Twist2Q9D030 160 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tstd3Q9D0B5 157 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Plag1Q9QYE0 499 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Ramp2Q9WUP0 189 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Loxl3Q9Z175 754 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tcf7l1Q9Z1J1 584 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm5493S4R2D1 92 aa6.21□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Trbv21A0A0A6YX06 97 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 A0A1L1SR50 188 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Samt3A2ARK7 233 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 4930402F06RikA2AUQ8 332 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr543E9PWI5 336 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm37240E9QAY5 252 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 FiglaO55208 194 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tcstv3O70518 169 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 GrnP28798 589 aaKnown RBP6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Cd28P31041 218 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gbx1P82976 418 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Hoxd1Q01822 328 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 PkibQ04758 92 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn1r11Q3SXA2 299 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Slc22a15Q504N2 544 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Foxd3Q61060 465 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Slc35a1Q61420 336 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr885Q7TRE0 309 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 C2cd4bQ80XU5 340 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Fastkd3Q8BSN9 661 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Smim37Q8BT35 56 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Coro2aQ8C0P5 524 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Nudt6Q8CH40 313 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn1r23Q8R2D0 302 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr51Q8VGG9 307 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Smim3Q99PE5 60 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Med31Q9CXU1 131 aaKnown RBP6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Trappc4Q9ES56 219 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 CtsjQ9R014 334 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm34653A0A1L1SR01 368 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm12666A2AMD0 254 aaKnown RBP6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr1205A2ATJ7 307 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm15155B1B034 138 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn2r106E9PY92 862 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm10608E9PZ13 166 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr288E9Q1P2 318 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr1249L7MU51 318 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 DdostO54734 441 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Ppt1O88531 306 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 P01735 133 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 P01808 119 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 CtseP70269 397 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Rnf133Q14B02 382 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Dcp1bQ3U564 578 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Apobec4Q497M3 374 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr17Q7TRM9 315 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn1r192Q8K4C9 300 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn1r198Q8R263 300 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Vmn1r17Q8R2D8 303 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr1263Q8VG63 306 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Olfr283Q8VGU2 309 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Ankrd10Q99LW0 415 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Arpc3Q9JM76 178 aaKnown RBP6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Tmem201A2A8U2 664 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Kdf1A2A9F4 397 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Mettl8A2AUU0 281 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Nkx6-2D3Z4R4 277 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gm20715E9Q3L7 95 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 OpcmlG5E8G3 345 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Nme6O88425 189 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 P03976 113 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Wfdc18P62810 74 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Sult4a1P63046 284 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Mrgprb2Q3KNA1 338 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 1700066B19RikQ3TS39 127 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Mettl7a2Q5I0W6 244 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 ArhgdibQ61599 200 aaKnown RBP6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Plekhm1Q7TSI1 1074 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Slc34a3Q80SU6 601 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Ticam1Q80UF7 732 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Fbxl2Q8BH16 423 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Rrnad1Q8BZG5 475 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Gpr22Q8BZL4 432 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Fam221aQ8C790 301 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 WrbQ8K0D7 174 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 BanpQ8VBU8 548 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Fgfrl1Q91V87 529 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 D10Jhu81eQ9D172 266 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Cthrc1Q9D1D6 245 aa6.2□□□□□ -1.42
Bdnf-201ENSMUST00000053317 Adam28Q9JLN6 793 aa6.2□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms