RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Adh4Q9QYY9 377 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 ChrdQ9Z0E2 948 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Trbv12-1A0A0B4J1H0 124 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm4131A0A140LJ24 318 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fam136b-psA0A140T8T1 138 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r152E9Q9N3 307 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r104L7N293 307 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cdk1P11440 297 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Klrb1cP27814 223 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Efna1P52793 205 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Wdr34Q5U4F6 535 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Klra2Q60660 288 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cyb561Q60720 250 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr5Q60889 312 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Bcap29Q61334 240 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Foxb2Q64733 428 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 ScocQ78YZ6 125 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 NarflQ7TMW6 476 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr198Q7TS40 306 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tbl1xr1Q8BHJ5 514 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Utp15Q8C7V3 528 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sav1Q8VEB2 386 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dkk4Q8VEJ3 221 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1361Q8VFH0 317 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Asb15Q8VHS6 583 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Defb8Q91V82 60 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Commd4Q9CQ02 199 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gdpd1Q9CRY7 314 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Phf19Q9CXG9 578 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rps19Q9CZX8 145 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Keg1Q9DCY0 295 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cldn12Q9ET43 244 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Khdrbs3Q9R226 346 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 CymB7ZWD6 379 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr370E9Q848 314 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr199F6ZUS0 308 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r13G5E8I3 300 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Camk2aP11798 478 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 C1qbP14106 253 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cox4i1P19783 169 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Eci1P42125 289 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 NodalP43021 354 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 PitpnaP53810 271 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Crybb2P62696 205 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Acta2P62737 377 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Actg2P63268 376 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Has2P70312 552 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Pdss2Q33DR3 401 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Elmod1Q3V1U8 326 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp866Q6PGD2 520 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fblim1Q71FD7 375 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 B630019K06RikQ7TNS5 333 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr787Q7TRI1 312 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ptbp3Q8BHD7 523 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Csnk1a1Q8BK63 337 aaKnown RBP7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zbtb37Q8C3U9 504 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fate1Q8CEK7 99 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ccm2lQ8VCC6 481 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1497Q8VG11 314 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Bcdin3dQ91YP1 285 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tspan2Q922J6 221 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Eif1bQ9CXU9 113 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Samd8Q9DA37 478 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 P2ry4Q9JJS7 361 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mlf1Q9QWV4 267 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Jmjd1cQ69ZK6 2350 aa7.74□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr420E9Q4G0 321 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr172E9Q8F6 309 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Trav13d-3J3QMG8 112 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm6803J3QPI8 144 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 DcnP28654 354 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rac3P60764 192 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Znf354aQ61751 572 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1281Q7TQY6 305 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rasgef1bQ8JZL7 473 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Abhd17cQ8VCV1 320 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 D1Ertd622eQ8VEB3 207 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfand2bQ91X58 257 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Hrh4Q91ZY2 391 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Serpinb7Q9D695 380 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 FryE9Q8I9 3020 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Eml6Q5SQM0 1958 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm438B1ASB3 393 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Hsd17b8P50171 259 aaKnown RBP7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sf3b6P59708 125 aaKnown RBP7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 TsxP70675 144 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr90Q0VEL5 310 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm7030Q0WXH6 285 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 St3gal2Q11204 350 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Parp8Q3UD82 852 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Usf1Q61069 310 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Slc6a8Q8VBW1 640 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sco2Q8VCL2 255 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr446Q8VEV0 308 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr970Q8VFN3 311 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr985Q8VGB4 311 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Chchd6Q91VN4 273 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 MrgprdQ91ZB8 321 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Letmd1Q924L1 360 aa7.73□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lrrc18Q9CQ07 262 aa7.73□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms