RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 UCHL1P09936 223 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 MYL9P24844 172 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 OR3A2P47893 321 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 MMP16P51512 607 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 PRKXP51817 358 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 PSMA6P60900 246 aaKnown RBP11.48□□□□□ -0.57
PHGDH-221ENST00000641573 GRB2P62993 217 aaKnown RBP11.48□□□□□ -0.57
PHGDH-221ENST00000641573 FAPQ12884 760 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 HNRNPA0Q13151 305 aaKnown RBP11.48□□□□□ -0.57
PHGDH-221ENST00000641573 SF3B4Q15427 424 aaKnown RBP eCLIP11.48□□□□□ -0.573e-16■■■■■ 41.5
PHGDH-221ENST00000641573 ODF4Q2M2E3 257 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 BCL2L15Q5TBC7 163 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 C9orf135Q5VTT2 229 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 RDH10Q8IZV5 341 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
PHGDH-221ENST00000641573 C9orf106Q8NAJ2 232 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 OR6Q1Q8NGQ2 317 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 GPR148Q8TDV2 347 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 DDX28Q9NUL7 540 aaKnown RBP11.48□□□□□ -0.57
PHGDH-221ENST00000641573 FAM206AQ9NX38 181 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 A3GALT2U3KPV4 340 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SMIM30A4D0T7 59 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 ACOD1A6NK06 481 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 PIN1P1O15428 100 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 FARS2O95363 451 aaKnown RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 TPOP07202 933 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 MAGEB1P43366 347 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SOX2P48431 317 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 FOXG1P55316 489 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 CAV3P56539 151 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 PCBD1P61457 104 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 RAB35Q15286 201 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 MOGQ16653 247 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 Q499Y3 187 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 HSD17B12Q53GQ0 312 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 FBXW9Q5XUX1 488 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 NSUN5P2Q63ZY6 315 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 OR2A2Q6IF42 318 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF704Q6ZNC4 412 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SLC16A14Q7RTX9 510 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 ABHD12BQ7Z5M8 362 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SYT9Q86SS6 491 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SKA3Q8IX90 412 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 GCNT2Q8N0V5 402 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 OR10AC1Q8NH08 325 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 SNRNP40Q96DI7 357 aaKnown RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 DERL3Q96Q80 235 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 ATF6BQ99941 703 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 KCNS3Q9BQ31 491 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-221ENST00000641573 PBOV1Q9GZY1 135 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 NOX4Q9NPH5 578 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 BRD7Q9NPI1 651 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 ASF1BQ9NVP2 202 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 PLEK2Q9NYT0 353 aa11.47□□□□□ -0.57
PHGDH-221ENST00000641573 POLEQ07864 2286 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 DNAJC13O75165 2243 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 A0A075B6Q4 140 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 H3BSH0 61 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 SGCEO43556 437 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 DOK2O60496 412 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 WDR1O75083 606 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 NCR1O76036 304 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 PATE4P0C8F1 98 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 OCM2P0CE71 109 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 GABRA1P14867 456 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF32P17041 273 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ACHEP22303 614 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 CTSSP25774 331 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 MAPK3P27361 379 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-221ENST00000641573 PTGER4P35408 488 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 CX3CR1P49238 355 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 SP5Q6BEB4 398 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-221ENST00000641573 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 FAM214BQ7L5A3 538 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF627Q7L945 461 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 TPRA1Q86W33 373 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ELMOD2Q8IZ81 293 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF283Q8N7M2 679 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 FAM57AQ8TBR7 257 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 TSEN15Q8WW01 171 aaKnown RBP11.46□□□□□ -0.57
PHGDH-221ENST00000641573 WACQ9BTA9 647 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 MOB1AQ9H8S9 216 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 CRNNQ9UBG3 495 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-221ENST00000641573 TIMM10BQ9Y5J6 103 aa11.46□□□□□ -0.57
PHGDH-221ENST00000641573 ZFHX3Q15911 3703 aa11.46□□□□□ -0.58
PHGDH-221ENST00000641573 A0A096LPE4 126 aa11.45□□□□□ -0.58
PHGDH-221ENST00000641573 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
PHGDH-221ENST00000641573 A0A1W2PPZ6 126 aa11.45□□□□□ -0.58
PHGDH-221ENST00000641573 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms