RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PNLDC1Q8NA58 520 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 OR5AP2Q8NGF4 316 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 OR5AK2Q8NH90 309 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 SUN3Q8TAQ9 357 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 LCN9Q8WX39 176 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 UBE2E3Q969T4 207 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 CNTNAP3Q9BZ76 1288 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 PCBD2Q9H0N5 130 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 GPR27Q9NS67 375 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 A0A0G2JK05 382 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 A0A1W2PS29 197 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 PRAMEF26H0Y7S4 382 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 SNAPC5O75971 98 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 IDH3GP51553 393 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 VAMP2P63027 116 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 SPOCK1Q08629 439 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 PACRGQ96M98 296 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 OCSTAMPQ9BR26 566 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 COMMD4Q9H0A8 199 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 SEC61A2Q9H9S3 476 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 TAS2R8Q9NYW2 309 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 CLDN4O14493 209 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 NPY4RP50391 375 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 RANBP3LQ86VV4 465 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 ZNF610Q8N9Z0 462 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 TSTD1Q8NFU3 115 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 OR56B1Q8NGI3 324 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 BPIFA2Q96DR5 249 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 ALX4Q9H161 411 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 KCNG2Q9UJ96 466 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 KCND3Q9UK17 655 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 KPTNQ9Y664 436 aa10.69□□□□□ -0.7
RBFOX1-224ENST00000641259 SPTY2D1-AS1A0A0U1RR47 76 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TNFRSF10CO14798 259 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TRGC2P03986 189 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NT5EP21589 574 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 LPAR6P43657 344 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 YPEL5P62699 121 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 PWWP2BQ6NUJ5 590 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 SPNS3Q6ZMD2 512 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TMEM74BQ9NUR3 256 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 PARPBPQ9NWS1 579 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TNFSF18Q9UNG2 199 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 HS3ST3A1Q9Y663 406 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 SEC16AO15027 2179 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 A0A0A6YYD5 115 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 BHLHE40O14503 412 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 B4GALT2O60909 372 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 HCKP08631 526 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 PAX6P26367 422 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 FHITP49789 147 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 PKIAP61925 76 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 CDK5R1Q15078 307 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 ZIC1Q15915 447 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NCR3LG1Q68D85 454 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RAB42Q8N4Z0 105 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NUP43Q8NFH3 380 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NEURL3Q96EH8 262 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 PTCHD1Q96NR3 888 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RIMS4Q9H426 269 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 COLEC10Q9Y6Z7 277 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 EML5Q05BV3 1969 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 A0A1W2PPC4 97 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 ZNF860A6NHJ4 632 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 MAN2B1O00754 1011 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 ATXN7O15265 892 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 THBS1P07996 1170 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RAB40ALP0C0E4 278 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 GAAP10253 952 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 OMGP23515 440 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RABIFP47224 123 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NKAIN1Q4KMZ8 207 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 SLC35D2Q76EJ3 337 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 GATSQ8NAP1 163 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 MORN4Q8NDC4 146 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 OR10G6Q8NH81 332 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 GPBAR1Q8TDU6 330 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TMEM239Q8WW34 195 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RAB40AQ8WXH6 277 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 CXorf40BQ96DE9 158 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 MS4A6EQ96DS6 147 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 Q96M85 177 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 RAB11FIP5Q9BXF6 653 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 TWSG1Q9GZX9 223 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 NCDNQ9UBB6 729 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 APOBEC3BQ9UH17 382 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 STEAP1Q9UHE8 339 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 GAB2Q9UQC2 676 aa10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 EXOGQ9Y2C4 368 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-224ENST00000641259 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
RBFOX1-224ENST00000641259 EIF1AYO14602 144 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-224ENST00000641259 PLPP2O43688 288 aa10.67□□□□□ -0.7
RBFOX1-224ENST00000641259 CTSVO60911 334 aa10.67□□□□□ -0.7
RBFOX1-224ENST00000641259 RPS2P15880 293 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-224ENST00000641259 DNASE1L1P49184 302 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms