RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 CDRT15Q96T59 188 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 SUCNR1Q9BXA5 334 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 ESM1Q9NQ30 184 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 ARL8BQ9NVJ2 186 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 PPIAL4EA0A075B759 164 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 PPIAL4CA0A0B4J2A2 164 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 OR6C68A6NDL8 312 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 PPIAL4DF5H284 164 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 TRIM77I1YAP6 450 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 DYNC1I1O14576 645 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 MLNRO43193 412 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 ZNF205O95201 554 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-211ENST00000641009 PPIAL4FP0DN26 164 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 NOS3P29474 1203 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
LINC00339-211ENST00000641009 GSSP48637 474 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 GYS2P54840 703 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 SLC35F1Q5T1Q4 408 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 ZNF620Q6ZNG0 422 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 NAA40Q86UY6 237 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 ZBTB46Q86UZ6 589 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 PITX2Q99697 317 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 IL1RAPQ9NPH3 570 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 TMCC3Q9ULS5 477 aa11.7□□□□□ -0.54
LINC00339-211ENST00000641009 CEACAM18A8MTB9 384 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 IQCF6A8MYZ5 107 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-211ENST00000641009 F5H5K5 113 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 F5H5P2 479 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 HLA-DQA2P01906 255 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 ACSM4P0C7M7 580 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 GGT2P36268 569 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 IFNGR2P38484 337 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 ZNF154Q13106 437 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 KRTAP27-1Q3LI81 207 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 CLEC12AQ5QGZ9 265 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 SLC27A4Q6P1M0 643 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 PGBD2Q6P3X8 592 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 COLCA1Q6ZS62 124 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 ZDHHC21Q8IVQ6 265 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 GNPDA2Q8TDQ7 276 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 GCDHQ92947 438 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-211ENST00000641009 DVL3Q92997 716 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-211ENST00000641009 ATF6BQ99941 703 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 SLC30A2Q9BRI3 323 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 CDADC1Q9BWV3 514 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 C1QTNF5Q9BXJ0 243 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 EGLN3Q9H6Z9 239 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 MRPL22Q9NWU5 206 aaKnown RBP11.69□□□□□ -0.54
LINC00339-211ENST00000641009 CYB5R1Q9UHQ9 305 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 TAGLN3Q9UI15 199 aa11.69□□□□□ -0.54
LINC00339-211ENST00000641009 POLR3KQ9Y2Y1 108 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-211ENST00000641009 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 A8MXK9 166 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 RRP9O43818 475 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 HLA-DPB1P04440 258 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 SELEP16581 610 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 ZNF12P17014 697 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 RPS27P42677 84 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 TRAP1Q12931 704 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 TSPAN31Q12999 210 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 ESCO2Q56NI9 601 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 ARMCX4Q5H9R4 360 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 MOGAT3Q86VF5 341 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 DEFB107AQ8IZN7 70 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 MUC20Q8N307 709 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 ZDHHC22Q8N966 263 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 OR9Q2Q8NGE9 314 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 OR2AJ1Q8NGZ0 328 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 RBM4Q9BWF3 364 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 HCAR1Q9BXC0 346 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 PNRC2Q9NPJ4 139 aaKnown RBP11.68□□□□□ -0.54
LINC00339-211ENST00000641009 PPIAL4AQ9Y536 164 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 INSIG2Q9Y5U4 225 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 AUP1Q9Y679 476 aa11.68□□□□□ -0.54
LINC00339-211ENST00000641009 IDH3BO43837 385 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 LCATP04180 440 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 WNT2P09544 360 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 FPR2P25090 351 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 PYCR1P32322 319 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 COMPP49747 757 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-211ENST00000641009 GNGT1P63211 74 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 MXRA7P84157 204 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 GK2Q14410 553 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-211ENST00000641009 SLC36A3Q495N2 470 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 KLF17Q5JT82 389 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-211ENST00000641009 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 CYB561A3Q8NBI2 242 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 ZNRF4Q8WWF5 429 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
LINC00339-211ENST00000641009 MAP6Q96JE9 813 aa11.67□□□□□ -0.54
LINC00339-211ENST00000641009 BTBD10Q9BSF8 475 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms