RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 ARMC7Q9H6L4 198 aa6.54□□□□□ -1.36
SCARB2-226ENST00000640916 BCL2L10Q9HD36 194 aa6.54□□□□□ -1.36
SCARB2-226ENST00000640916 DUX4Q9UBX2 424 aa6.54□□□□□ -1.36
SCARB2-226ENST00000640916 TIMM10BQ9Y5J6 103 aa6.54□□□□□ -1.36
SCARB2-226ENST00000640916 ELOVL7A1L3X0 281 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CENPBD1B2RD01 187 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 E9PBE3 544 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 OR6A2O95222 327 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 ECDO95905 644 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-226ENST00000640916 SCGB1D2O95969 90 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CH25HO95992 272 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 PAHP00439 452 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 GYPAP02724 150 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 THY1P04216 161 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CCDC159P0C7I6 412 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 COX5BP10606 129 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 FAHP16930 419 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 S100A3P33764 101 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 UGT2B15P54855 530 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 DSTNP60981 165 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 PRAMEF6Q5VXH4 476 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 FBXW12Q6X9E4 464 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 ETV3LQ6ZN32 361 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 ZNF572Q7Z3I7 529 aaPredicted RBP6.53□□□□□ -1.36
SCARB2-226ENST00000640916 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 NUDCD3Q8IVD9 361 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CCDC63Q8NA47 563 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 SLC7A6Q92536 515 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 NSMAFQ92636 917 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 VPS33AQ96AX1 596 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CHID1Q9BWS9 393 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 CDCA4Q9BXL8 241 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 MEAF6Q9HAF1 191 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 SMURF2Q9HAU4 748 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 KAAG1Q9UBP8 84 aa6.53□□□□□ -1.36
SCARB2-226ENST00000640916 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
SCARB2-226ENST00000640916 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 IQCF6A8MYZ5 107 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PF4P02776 101 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PF4V1P10720 104 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 FSTP19883 344 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 EEF1B2P24534 225 aaKnown RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PRKAR1BP31321 381 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 CD200P41217 278 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 HTR5AP47898 357 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 CCT5P48643 541 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 BMXP51813 675 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 UBE2E1P51965 193 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 UFM1P61960 85 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ACSM1Q08AH1 577 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 AANATQ16613 207 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 LRRC75BQ2VPJ9 315 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 GTDC1Q4AE62 458 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 CEP85LQ5SZL2 805 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 DHRS4L2Q6PKH6 230 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 TRIML2Q8N7C3 387 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 CLDN22Q8N7P3 220 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 CELF2-AS1Q8N7Q2 184 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 FBLIM1Q8WUP2 373 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 MAL2Q969L2 176 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ERGIC1Q969X5 290 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PPP1R36Q96LQ0 422 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 RCHY1Q96PM5 261 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 OR5M11Q96RB7 305 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 FMO2Q99518 471 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ECSITQ9BQ95 431 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 DCTN5Q9BTE1 182 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 MUC13Q9H3R2 512 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 RAB18Q9NP72 206 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 SLCO1B3Q9NPD5 702 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 NANSQ9NR45 359 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 UFSP2Q9NUQ7 469 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PTTG3PQ9NZH4 202 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 PSMC3IPQ9P2W1 217 aaPredicted RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ONECUT1Q9UBC0 465 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 RNF7Q9UBF6 113 aa6.52□□□□□ -1.37
SCARB2-226ENST00000640916 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
SCARB2-226ENST00000640916 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 OOEPA6NGQ2 149 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 NKX6-3A6NJ46 265 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 RIPK2O43353 540 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 NDUFA2O43678 99 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 KRT75O95678 551 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 PTBP3O95758 552 aaKnown RBP6.51□□□□□ -1.37
SCARB2-226ENST00000640916 DBHP09172 617 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 TSPAN19P0C672 248 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 IRF2P14316 349 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 ETS2P15036 469 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 AMY2BP19961 511 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 FPR3P25089 353 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 CHATP28329 748 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 RGS6P49758 472 aa6.51□□□□□ -1.37
SCARB2-226ENST00000640916 RPL18Q07020 188 aaKnown RBP6.51□□□□□ -1.37
SCARB2-226ENST00000640916 DPY19L1Q2PZI1 675 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms