RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 R4GMQ9 66 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 GON4LQ3T8J9 2241 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 LRP4O75096 1905 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 BLACEA4D250 179 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 METTL21EPA6NDL7 271 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 C5orf51A6NDU8 294 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 ISG15P05161 165 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 AKR1C4P17516 323 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 CX3CR1P49238 355 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 GPR85P60893 370 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 NRIP2Q9BQI9 281 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.25□□□□□ -0.45
PAX6-280ENST00000640872 G6PC2Q9NQR9 355 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 CPAMD8Q8IZJ3 1885 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 TRAV36DV7A0A075B6V5 113 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 C13orf42A0A1B0GVH6 325 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 CLDN4O14493 209 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 OR2T1O43869 369 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 COL9A1P20849 921 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 PDZK1IP1Q13113 114 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 UNC119Q13432 240 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 SGCBQ16585 318 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 ZNF761Q86XN6 746 aaPredicted RBP12.24□□□□□ -0.45
PAX6-280ENST00000640872 SKA3Q8IX90 412 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 C2CD4CQ8TF44 421 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 FAM46BQ96A09 425 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 CDC6Q99741 560 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 RTN4RQ9BZR6 473 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 LAT2Q9GZY6 243 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 EMC9Q9Y3B6 208 aa12.24□□□□□ -0.45
PAX6-280ENST00000640872 NFYBP25208 207 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 SLC6A9P48067 706 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 QRFPP83859 136 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 ZNF117Q03924 483 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 GFOD2Q3B7J2 385 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 OOSP2Q86WS3 158 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 FRMD1Q8N878 549 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 AVL9Q8NBF6 648 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 CNTD2Q9H8S5 307 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
PAX6-280ENST00000640872 LPAR3Q9UBY5 353 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 MSGN1A6NI15 193 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 WISP1O95388 367 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 BIKQ13323 160 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 SQSTM1Q13501 440 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 TOMM34Q15785 309 aaPredicted RBP12.23□□□□□ -0.45
PAX6-280ENST00000640872 POMZP3Q6PJE2 187 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 MAMDC2Q7Z304 686 aaPredicted RBP12.23□□□□□ -0.45
PAX6-280ENST00000640872 MARCH3Q86UD3 253 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 HOGA1Q86XE5 327 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 GABRG3Q99928 467 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
PAX6-280ENST00000640872 TXNIPQ9H3M7 391 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 ZMAT5Q9UDW3 170 aaKnown RBP12.23□□□□□ -0.45
PAX6-280ENST00000640872 OR52A1Q9UKL2 312 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 FAM96BQ9Y3D0 163 aa12.23□□□□□ -0.45
PAX6-280ENST00000640872 A0A1W2PQF6 199 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 GMFGO60234 142 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 MPZL1O95297 269 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 LYL1P12980 280 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 MUC1P15941 1255 aaPredicted RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 TBPP20226 339 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 CXCR1P25024 350 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 SLC6A8P48029 635 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 TAS2R31P59538 309 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 CYCSP99999 105 aaKnown RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 TMEM31Q5JXX7 168 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ZFP82Q8N141 532 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ZNF321PQ8N8H1 164 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 DTWD2Q8NBA8 298 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 MARCH1Q8TCQ1 289 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ADAMTS18Q8TE60 1221 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 SLC37A2Q8TED4 501 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 FANCFQ9NPI8 374 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 WDR87Q6ZQQ6 2873 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 LOC101059948A0A1B0GTJ6 334 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 SSX5O60225 188 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 EIF3GO75821 320 aaKnown RBP eCLIP12.22□□□□□ -0.45
PAX6-280ENST00000640872 FOLR2P14207 255 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 NTSR1P30989 418 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 C19orf47Q8N9M1 422 aaKnown RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 ADAMTS17Q8TE56 1095 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ROBO4Q8WZ75 1007 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 ZNF775Q96BV0 537 aaPredicted RBP12.22□□□□□ -0.45
PAX6-280ENST00000640872 SLC25A36Q96CQ1 311 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 RHOFQ9HBH0 211 aa12.22□□□□□ -0.45
PAX6-280ENST00000640872 CLEC1BQ9P126 229 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms