RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PLA2G7Q13093 441 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.84■□□□□ 0.13
SCARB2-223ENST00000640640 DEFB127Q9H1M4 99 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCARB2-223ENST00000640640 A0A0A6YYJ9 748 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 TGM1P22735 817 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 KRBOX4Q5JUW0 171 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 RHBDD2Q6NTF9 364 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 SFTPA2Q8IWL1 248 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 C17orf47Q8NEP4 570 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 SGK3Q96BR1 496 aa15.84■□□□□ 0.13
SCARB2-223ENST00000640640 NTN1O95631 604 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 FMODQ06828 376 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 ZAR1Q86SH2 424 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 GLCCI1Q86VQ1 547 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 COMTD1Q86VU5 262 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 OR51A2Q8NGJ7 313 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 LANCL2Q9NS86 450 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 CCSO14618 274 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 TNFSF11O14788 317 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 GIPP09681 153 aaPredicted RBP15.83■□□□□ 0.13
SCARB2-223ENST00000640640 S100PP25815 95 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 ZNF121P58317 390 aaPredicted RBP15.83■□□□□ 0.13
SCARB2-223ENST00000640640 BATF2Q8N1L9 274 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 FLRT3Q9NZU0 649 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.13
SCARB2-223ENST00000640640 TNFSF15O95150 251 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 MMP15P51511 669 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 MVDP53602 400 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 DSCR4P56555 118 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-223ENST00000640640 RAB5BP61020 215 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 GNRHR2Q96P88 292 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 NECAP2Q9NVZ3 263 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 LUZP4Q9P127 313 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 EXO1Q9UQ84 846 aaKnown RBP15.83■□□□□ 0.12
SCARB2-223ENST00000640640 IGKV1-8A0A0C4DH67 115 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 PHF1O43189 567 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-223ENST00000640640 CDAP32320 146 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 RAD52P43351 418 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 MC2RQ01718 297 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 TRA2AQ13595 282 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCARB2-223ENST00000640640 MSMO1Q15800 293 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 PHLDA2Q53GA4 152 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 OR51F2Q8NH61 342 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 ZNF285Q96NJ3 590 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 ZPBPQ9BS86 351 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 GNG12Q9UBI6 72 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 CES1P1Q9UKY3 287 aa15.83■□□□□ 0.12
SCARB2-223ENST00000640640 RGPD3A6NKT7 1758 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ANKRD33BA6NCL7 494 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TRIM64A6NGJ6 449 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 HRKO00198 91 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 SPNP16150 400 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 OMGP23515 440 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ECI1P42126 302 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 RFX2P48378 723 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 SRPXP78539 464 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 CATR1Q13166 79 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 CD226Q15762 336 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TBC1D28Q2M2D7 210 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ZNF529Q6P280 563 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ANKRD37Q7Z713 158 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 DND1Q8IYX4 353 aaKnown RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ALKBH3Q96Q83 286 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 A0A096LPE4 126 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 A0A1W2PPZ6 126 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 OR6C65A6NJZ3 312 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 MED6O75586 246 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 GZMKP49863 264 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ZNF136P52737 540 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 LTC4SQ16873 150 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 WDR38Q5JTN6 314 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ARPC5LQ9BPX5 153 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 NEURL2Q9BR09 285 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 PCYT1BQ9Y5K3 369 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 SPTBN2O15020 2390 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TNFSF12O43508 249 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 XRCC3O43542 346 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 B4GALT1P15291 398 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 BCKDHBP21953 392 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 RAB31Q13636 194 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TAF9Q16594 264 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 ZXDCQ2QGD7 858 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 DMRTC1Q5HYR2 192 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 PWWP2BQ6NUJ5 590 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 NOXO1Q8NFA2 376 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 OR2I1PQ8NGU4 316 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 INTS12Q96CB8 462 aaKnown RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 C4orf45Q96LM5 186 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 NMNAT2Q9BZQ4 307 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 TMEM9BQ9NQ34 198 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 EXOSC3Q9NQT5 275 aaKnown RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 IGHV4-34P06331 123 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 EDN3P14138 238 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 UBE2MP61081 183 aaKnown RBP15.82■□□□□ 0.12
SCARB2-223ENST00000640640 LSMEM1Q8N8F7 131 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 OR4D6Q8NGJ1 314 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 GSX2Q9BZM3 304 aa15.82■□□□□ 0.12
SCARB2-223ENST00000640640 MSTNO14793 375 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms